Pairwise Alignments

Query, 226 a.a., L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ from Variovorax sp. SCN45

Subject, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 94  ELFALLAGLITYTAAFIAEIVRAGIQAIGQGQWEAAQSLGLRRGKVLRLVIVPQALRVIV 153
           +L   L G++ ++AA++AE++R G+QAI +GQ+EAA +LGL   K + L+I+PQAL++ +
Sbjct: 229 KLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITI 288

Query: 154 PPLTSQYLNLIKHSSLAVAIGYPDLVSV---VNTTLNQTGQAIEGILIIMGAFMTVSLLI 210
           P + + ++ L K +SL + IG  D++ +    NT  N  G A E  + +   F      +
Sbjct: 289 PSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGM 348

Query: 211 SLLMNWYNKRI 221
           S    W   ++
Sbjct: 349 SRYSIWLEGKL 359