Pairwise Alignments

Query, 369 a.a., L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM from Variovorax sp. SCN45

Subject, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  313 bits (803), Expect = 4e-90
 Identities = 160/355 (45%), Positives = 237/355 (66%), Gaps = 8/355 (2%)

Query: 10  PQLP---FATARMSWRRIRESILHSPASVLGTVLVVWLILMAAPALLNWLLLKASFTAPD 66
           P LP     T  + W  +R+++ +   + + T+++ +L +     +L+W +  A+++   
Sbjct: 8   PSLPPPSNTTGVVGW--LRKNLFNGVFNSIATLVLGYLAIQGLLNILDWAIFNANWSGTT 65

Query: 67  ARTCREASGACWSFIREKYRLILFGTYPFDQQWRPLLATLLLIGSIVVTGVQRLRGRGLI 126
              C    GACW FI  ++   ++G YP  + WRP L    L   + +   ++   RG I
Sbjct: 66  RNDCT-LEGACWVFISVRWEQFMYGFYPAAELWRPRLFFFTLALFVALLAYEKTPKRGWI 124

Query: 127 --VWWALALATVAWLMWGGLFGLTFVENVRWGGLPLTLMLSVFGIAFAFPFGVCLALGRR 184
             V+  +     A L++GG+FGL  VE  +WGGL +TL++++ GI  + P GV LALGRR
Sbjct: 125 WLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALGRR 184

Query: 185 SRMPAIKAICVGYIEFIRGVPLISLLFMSSVMLPLFLPEGFSIDKLLRAQIAIIMFAAAY 244
           S MP I+++C  YIE  RGVPLI++LFM+SVMLPLFL +G  IDKLLRA I ++MF+AAY
Sbjct: 185 SDMPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFLSQGSEIDKLLRALIGVVMFSAAY 244

Query: 245 IAEIVRGGLQSIPKGQYEGADSIGLSYWQQMRKVIVPQALKVVIPPLVSTFIALFKDTSL 304
           +AE++RGGLQ+IPKGQYE AD++GLSYW++M  +I+PQALK+ IP +V+TFI LFKDTSL
Sbjct: 245 MAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTFIGLFKDTSL 304

Query: 305 VVIIGIFDLTQSAKAALADPAWSGFGVEAYLFIGLIYFAFCYCISKYSSTLERSL 359
           V+IIG+FD+    ++A  DP W GF  E+Y+F+ L+++ FC+ +S+YS  LE  L
Sbjct: 305 VLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYSIWLEGKL 359