Pairwise Alignments

Query, 311 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  158 bits (399), Expect = 2e-43
 Identities = 94/296 (31%), Positives = 161/296 (54%), Gaps = 5/296 (1%)

Query: 10  MKALDSLRIFVTTQRKGSLSAAARSLSLSPATISRRISAMEEELGVQLVDRTSRNLKVTE 69
           MKAL+ L +FV T R+GS S AA SLSL+ A +S  I  +EE++   L  R++R++++T 
Sbjct: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60

Query: 70  AGQAFLERAEAMLELMNEAEQAVHNARERPEGRLRVHSRTHIGLRVLAPLLPRFAELYPD 129
            G+ FL + +  L  + E    +  AR +  G+L + + + +G  +L   +  F  L+P+
Sbjct: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120

Query: 130 IRVELELSEHPINLVDQDFDVDVRTGESNDSGFVIKRLLSSDE-VLVASPAFVKTYSRIR 188
           + V+L+LS+   ++     D+ +R G+  DS  V   L  S+E VL ASP ++  +  I 
Sbjct: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180

Query: 189 HPTDLPQVRCLTYRRDREVTTWKYIDQAGEQKELLIQGVLSANNGELLRLAAIGGMGVAL 248
           HP DL    CL +     +     + + GE   +++QG  + N+GE++   A+ G G+A 
Sbjct: 181 HPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIAN 240

Query: 249 LSEATVRDDLRDGALVRLLPEYRFAVRAFSNGIFAVFRQSRVLPLKVRAFVDYVAE 304
            S   +  D+ DG LVR+LPE+     +    I+ V    R++   +RAF +++ E
Sbjct: 241 KSLMDISQDIIDGRLVRILPEW----ESGPVPIYMVCADRRLITPTIRAFQEFIRE 292