Pairwise Alignments

Query, 171 a.a., Extracytoplasmic function (ECF) sigma factor VreI from Variovorax sp. SCN45

Subject, 184 a.a., FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 4/154 (2%)

Query: 4   DTQLVLLNYLGRHYASLKQRLTRKLGNADDAGDALHDTWLRLKGNEDHGTVQNPGAYLSR 63
           D  L LL     H++ L   L+R++G  + A D   DT++RL  +   G ++ P AYLS 
Sbjct: 22  DADLALL--YRSHHSWLHSWLSRRIGCHESAADLAQDTFVRLLKSRQSGPLREPRAYLSS 79

Query: 64  MAVNIAVDVQRRQSRLLSGDEVEELLEEIEDPAPGPARTAEIRSDLDAVLTLLDRMPERR 123
           +A  + +D  RR  R L     E L       AP       I   L+ +  LLD +  R 
Sbjct: 80  IARGLMIDRYRR--RELERAYFESLALLPPQEAPSEEERLLILDSLERIDRLLDLLKPRV 137

Query: 124 RAVALLVHAEGLTQNEAAQRLGVSLRTVEYELKR 157
           R   LL   +GLT  + A++L VS  TVE +L +
Sbjct: 138 REAFLLAQLDGLTCLQIAEKLCVSRSTVERDLAK 171