Pairwise Alignments

Query, 299 a.a., Transcriptional activator MetR from Variovorax sp. SCN45

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  185 bits (469), Expect = 1e-51
 Identities = 98/289 (33%), Positives = 169/289 (58%), Gaps = 1/289 (0%)

Query: 1   MLERLHLSIVQQVEKQGSLTAAAGVLNLTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQ 60
           M+E  HL  +  +++ GSL  AA    +TQSALSH +K+LE ++ + I++R+ + L  TQ
Sbjct: 1   MIELRHLRTLVALKESGSLAGAAKKRFVTQSALSHQIKELETRINSAIFVRKSKPLSFTQ 60

Query: 61  AGQYLLAVANRVLPQLNLAEERLGQFAQGERGALRIGMECHPCYQWLLKIVSPYLAAWPD 120
            G  LL +A  +LP++   E  L      E   L +G+ECH C++WL+ ++  + A++P 
Sbjct: 61  EGARLLNLAEEILPKVIETEIDLKNGLGSEARDLFVGIECHSCFRWLMPVIEQFNASFPH 120

Query: 121 VDVDVKQKFQFGGIGALFGYEIDLLVTPDPLHKPGLKFEPVFDYEQVLVVAKDHALASAA 180
            ++++  +  F  + AL   ++D+++T DP+    + ++ +FD+E  L+VA DH LA   
Sbjct: 121 TNLELSSRHLFDSLTALKQGQLDVVLTSDPIPDHDIAYQHLFDFEVKLLVAADHPLAELP 180

Query: 181 YVKPRQLTQEVLISYPVDIERLDIYNQFLLPAGVTPKRHKAIETTDIMLQMVASGRGVAA 240
           YV   QL  + L++YPV ++RLDIY  F+ PAGV   +    + T ++LQ +A   GVAA
Sbjct: 181 YVTAAQLKDQTLLTYPVPLDRLDIYRHFMEPAGVPVAKQIRCDLTAMLLQRIACKDGVAA 240

Query: 241 LPRWLVEEYAARMDVVPVRLGARGIAKQIFLGAREADTAIDYVRAFIEL 289
           LP W + E A  + +  V+LG+ G+ + +F   R   ++    + ++ L
Sbjct: 241 LPSWSINE-AHGLSLKAVKLGSEGLRRPLFGAYRSNGSSARLAQQWLNL 288