Pairwise Alignments

Query, 518 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  128 bits (321), Expect = 6e-34
 Identities = 130/508 (25%), Positives = 215/508 (42%), Gaps = 37/508 (7%)

Query: 1   MKHLHGATLIAVLLTGATATAAFAATR-----IVVALPADIRSSMPGTNRDDNTDSVILN 55
           MK L  + +    L  A A AA AA +     +VV   A+ +S  P T    N   +++N
Sbjct: 1   MKRLFRSAIALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVN 60

Query: 56  VVEGLVGYGEGG-DVKPLLARSVETSADGLTYTFRLRSDVRFHNGDKLSSADVLWSWNRY 114
           V +GLV + +G  +V+P LA S + S DG TYTF LR  V+FH+G    +  V ++++R 
Sbjct: 61  VYDGLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRM 120

Query: 115 MDPKTEWRCLAEFD-GRNDLKVLKVEAPDASTVVMRINRRSALFLDTLARTDCGMTG-IL 172
           +     +     F    N   V  V   D  TV  +++   A FL  LA      TG I+
Sbjct: 121 LKKDHPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYP----TGLIV 176

Query: 173 SKASVKADGT--WDRPIGTGPFEFSDWKRGRGITLSRFAGYKSPEGSKPDGYVGLKTPGV 230
           S  +V+  G      P GTGPF+F +W   + + + R   Y                  +
Sbjct: 177 SPVAVEKHGKEYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAK------------L 224

Query: 231 DVVQLQVIPDPATVKLGMASKSVDI-AQLLSSDVVEVKNDPALVTSAESDSSKHALLFQT 289
             V  + I D  T    M +  +D+  ++   ++   + D     + ++       +  T
Sbjct: 225 QAVVFRPITDANTRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNT 284

Query: 290 RDPLMADAKFRRAVAAALDYKQLVDVASDGLSKPNNSAVFERSVYADATQRKGFKTDLTQ 349
           +    AD + R+A   A++ + LVD    G +      +     + +++  + +  D  +
Sbjct: 285 KQGPFADKRVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSV-EPYAHDPEK 343

Query: 350 AKALLKESSYRGQTIKLIANK--RSPMPSFQVALVTQAMLQAIGIKVEIEVLEWATQLDR 407
           AKALL E+      +     +     +    +    QA LQA+G KV+IE  EW T L R
Sbjct: 344 AKALLAEAGVENPQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGR 403

Query: 408 YN---AGNYQMMSFSYSGRLDPALSY----EQFTGDKARQARKVWDNPEAIALIETARTV 460
            N    G   M   ++       + Y         DK       + NP+   L+E AR  
Sbjct: 404 VNPGLEGKADMAEMAWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARRS 463

Query: 461 SDKAERQKIFDRLHEMALADVPLINLYN 488
           +D+AER K++  +  +   D P + + N
Sbjct: 464 TDQAERGKLYGEVQSIVHDDAPWLFVAN 491