Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  223 bits (568), Expect = 5e-63
 Identities = 124/316 (39%), Positives = 177/316 (56%), Gaps = 9/316 (2%)

Query: 1   MLRFVVRRLLAAAPTLFISGAAVFFLIRLIPGDPAALLLGD---QADAASLADLHRRLGL 57
           MLRF +RR+L   PT+ +    +F +  ++PG  AA L  D    AD   +A L+   GL
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 58  DQGLPTQFSLWFQRMLHGDLGQSIRTGEPVLSLVIDHFVVSARIVFVAVALAAAIAVPAG 117
           ++ L  +F  +   +   DLG S RT +PV+ L+ D    S ++   A+  A  I+VP G
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120

Query: 118 MLAAWRQNGKLDIGLVSAATVLLSIPSFWLGLMLLYLFGLELGWLPVIGYVDFSEDPVAA 177
            +AA R    LD   +  A   LS+P FWLGL+++YLF L+L WLP  GY D S      
Sbjct: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGDGS------ 174

Query: 178 LTYMVLPVATLVLHETGILIRMARASTLEVLRLDYITYARSKGLSEGAVLWRHAFRNAFG 237
              ++LP  TL +    +L R  RA  L+VL  D+I  A SKG+SE  V+  H  RNA  
Sbjct: 175 FRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALV 234

Query: 238 PTWTLIGLVLGNLLGGIAVVETVFTIPGLGRLLVDSIFGRDYPVIQGCLLFVAFVYVLIN 297
              T +GL  G+L+G   V+E +F  PG+G LLVDS+  RD PV+QG +L +   +++IN
Sbjct: 235 LIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVIN 294

Query: 298 LVVDLLYPLFDPRVAE 313
             VDL+Y   DPR+ +
Sbjct: 295 TAVDLIYAAIDPRIKQ 310