Pairwise Alignments

Query, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 560 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  403 bits (1035), Expect = e-116
 Identities = 228/530 (43%), Positives = 315/530 (59%), Gaps = 12/530 (2%)

Query: 7   SSLLQVSGLTLAL---ADGKALVHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPPA 63
           S  L +  L +AL   AD    ++GIS  +   E++ +VGESGSGK++ A +++ L  P+
Sbjct: 10  SPRLIIDDLRVALPKSADRPFALNGISLTVGADEIVCLVGESGSGKSMTAGAIMRLLGPS 69

Query: 64  VHRTAGSIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHT 123
              T G I+ +G ++  LS  A+R +RG+R+GM+FQEPMT+LNP   IG Q+ E    H 
Sbjct: 70  TPITGGRILLEGVDLLGLSEAAMRAVRGARVGMIFQEPMTALNPLHTIGDQIAETFRTHG 129

Query: 124 TLSPAQRRARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEP 183
           TL  A+   R+L++L  V I DP AA  AYPH  SGG RQR M+A A+ L P+LLIADEP
Sbjct: 130 TLGRAEIERRVLDLLAEVLIPDPVAAAKAYPHELSGGQRQRAMIAMALALEPALLIADEP 189

Query: 184 TTALDAVVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAA 243
           TTALD   Q +++ L+ +L R  GT VL ++HD  +VA   DR+ VM  G +VE    A 
Sbjct: 190 TTALDVTTQAQILALIRDLQRRKGTGVLFVTHDFGVVAEIADRVAVMRGGEVVEEGAAAQ 249

Query: 244 LVSAPREDYTRKLLAAMPTRGPVREIP-QAAPILEVDGLVLDFPAGGGLLSKRPPKRALK 302
           +++ P   YTR L+AA+P   P    P    P+L V+GL   + +GG          A+K
Sbjct: 250 VLNHPLHPYTRALIAAVPPLVPAPPRPVTGPPLLRVEGLSKTYRSGGFFGRGGRVTHAVK 309

Query: 303 GIDLRIAPGEVVALVGGSGSGKTTLGRAIAGLLQPSGGRILFEGKGIARRSEG-WARYRA 361
            +   +  G  + +VG SGSGK+TL R +  LL    G I  +   ++  ++  W R   
Sbjct: 310 DVSFTLRRGATLGIVGESGSGKSTLARCVVRLLTSESGSIHLDDIDLSALTDNDWHRESR 369

Query: 362 QCQMVFQDPASSLDPRMTVGASIGEALTGMPGLTPAARR---GRILEVLQEVSLPAEVAS 418
           + QMVFQDP  SL+PR  VG  + +     P +  A RR    R+ E+   V L  +   
Sbjct: 370 RIQMVFQDPYGSLNPRRRVGELVAQG----PIVRGAPRREVEARVRELFALVGLDPKAVD 425

Query: 419 RYPHELSGGQRQRVAIARAVVRRPAFIVADEPVSALDVTVRAQILELFAQLQSRHGFSCL 478
           R+PHE SGGQRQR+ +ARA+   P  +VADE VSALDV+V+AQ+L L A L+ R   S L
Sbjct: 426 RFPHEFSGGQRQRIGLARALALDPDVLVADEAVSALDVSVQAQVLALLADLRERLNLSVL 485

Query: 479 FISHDLAVVEQIADRVIVMRHGEIVEQGPRDEVFDRPHHDYTRELLAAAP 528
           FI+HDL V  QIAD ++VM+ G +VE GP   VF  PHH YT+ L+AA P
Sbjct: 486 FITHDLRVAGQIADDILVMKDGAVVEAGPTARVFADPHHPYTKTLMAAVP 535



 Score =  148 bits (374), Expect = 5e-40
 Identities = 101/267 (37%), Positives = 147/267 (55%), Gaps = 23/267 (8%)

Query: 9   LLQVSGLTLALADGKALVHG---------ISFDIAPGEMIGIVGESGSGKTLAARSLIGL 59
           LL+V GL+     G     G         +SF +  G  +GIVGESGSGK+  AR ++ L
Sbjct: 282 LLRVEGLSKTYRSGGFFGRGGRVTHAVKDVSFTLRRGATLGIVGESGSGKSTLARCVVRL 341

Query: 60  APPAVHRTAGSIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGL 119
               +   +GSI  D  +++AL+     +    RI MVFQ+P  SLNP   +G  + +G 
Sbjct: 342 ----LTSESGSIHLDDIDLSALTDNDWHR-ESRRIQMVFQDPYGSLNPRRRVGELVAQG- 395

Query: 120 ALHTTLSPAQRR---ARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPS 176
                +  A RR   AR+ E+   V + DP A +  +PH FSGG RQRI LA A+ L P 
Sbjct: 396 ---PIVRGAPRREVEARVRELFALVGL-DPKA-VDRFPHEFSGGQRQRIGLARALALDPD 450

Query: 177 LLIADEPTTALDAVVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMHHGRIV 236
           +L+ADE  +ALD  VQ +V+ L+ +L      +VL I+HDL +  +  D ++VM  G +V
Sbjct: 451 VLVADEAVSALDVSVQAQVLALLADLRERLNLSVLFITHDLRVAGQIADDILVMKDGAVV 510

Query: 237 ESNRTAALVSAPREDYTRKLLAAMPTR 263
           E+  TA + + P   YT+ L+AA+P R
Sbjct: 511 EAGPTARVFADPHHPYTKTLMAAVPGR 537