Pairwise Alignments

Query, 284 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 418 a.a., ABC-type branched-chain amino acid transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  169 bits (429), Expect = 7e-47
 Identities = 112/294 (38%), Positives = 162/294 (55%), Gaps = 31/294 (10%)

Query: 8   ILTLVAINVILALSLNLISGLCGQVSLGHAAFFGVGAYATALLAKA-GANLWLTLPAALL 66
           I TL+ I V+L L LN++ GL G + LG+  F+ VGAY  ALL+   G   W  LP A  
Sbjct: 116 IATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYTYALLSHYYGVGFWTALPIAGA 175

Query: 67  LAGVCGLVVGFCSLRVRDDFLAIATMAAGFLFLGVVRTSDAL-GGELGISQIPE------ 119
           +A + G ++GF  LR+R D+LAI T+  G +   ++R   ++ GG  GIS I +      
Sbjct: 176 MAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTSVTGGPNGISGIDKPTLFGL 235

Query: 120 -------SGLEGFYPYFVV------------LCAVAAGVFCTWVKKSWL----GYAFEAV 156
                   G++ F+ YF V            L A+   +   +V    L    G A+EA+
Sbjct: 236 SFDRRAAEGMQTFHEYFGVAYNSVNKVIFLYLIALLLVLLTLFVINRLLRMPIGRAWEAL 295

Query: 157 SADETAARSLGIDTPRFKLAAFALGTGLAGVAGCLYAYYLGTVGVEAFGFPVSVMILAMV 216
             DE A R+LG++    KL+AF LG   AG AG  +A   G V  E+F F  S +ILA+V
Sbjct: 296 REDEIACRALGMNPTVIKLSAFTLGATFAGFAGSFFAARQGLVSPESFTFIESAIILAIV 355

Query: 217 VIGGMGSIWGSVLAAALLTLAPEWFRFINDYKLLVFGLLLFVMMRFVPGGLFPL 270
           V+GGMGS  G +LAA ++ L PE  R  ++Y++L+FG L+ +MM + P GL P+
Sbjct: 356 VLGGMGSQLGVILAAIVMILLPELMREFSEYRMLMFGALMVLMMIWRPQGLLPM 409