Pairwise Alignments

Query, 313 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  133 bits (334), Expect = 1e-35
 Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 13/285 (4%)

Query: 11  GLINGAVYALIAIGLAMVFGLLRILHIAHAGLFALGGYLGLVVTNATG---------SFA 61
           GL  G+V  L AIGLA+ FG++ I+++AH  +  LG Y   +V +            S A
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 62  LGLAVSMAVVAACGVLMYRLCYEPILEQPPYVPLIASVGMFLAIEELLRLVFGDHGLSYH 121
           + L ++  V  A G+ + R      L   P   L+A+ G+ L +++ +R +FG       
Sbjct: 308 IALPLAFLVTGAVGLALERGVIR-FLYGRPLETLLATWGISLILQQTVRTIFGPTNREVG 366

Query: 122 VPP-LAGAIDLGGMRIKYAEIAVVVMACVLLGGLALFATRTRIGMAWRATVSEPRMAASC 180
            P  ++GA +LGG+ I +  + ++V A  +   L     +T +G+  RA     RMA+S 
Sbjct: 367 NPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSM 426

Query: 181 GVSLRQVRHLNFAIGSAFAAAAGVMVGVLNNLVEPSMGAVPSYKALAIIVLGGLGNMGGT 240
           G+    V  L FA+GS  A  AGV +  ++N V P++G      +  ++V GG+GN+ GT
Sbjct: 427 GIRTPWVDALTFALGSGIAGIAGVALSQIDN-VSPNLGQGYIIDSFMVVVFGGVGNLWGT 485

Query: 241 LVAALLLGLVEAFGATYLSNYLDRDSIAFAAMLCVLLVRPEGLFS 285
           LV A  LG++  F   Y    L +  +    ++  +  RP GLF+
Sbjct: 486 LVGAFSLGILNKFLEPYAGAVLGK-ILVLVLIILFIQKRPRGLFA 529