Pairwise Alignments

Query, 388 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 368 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  130 bits (328), Expect = 5e-35
 Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 6/348 (1%)

Query: 12  LGLACAAGLAGFAGGAFAQGATTRIGFQAGLTGPAAADGNAGLAAARLAVEQINGAGGVN 71
           LGLA    LA  +  A AQ    ++     +TG  +A G      A  AV  +N  GG+ 
Sbjct: 6   LGLAFGVSLA-LSTTALAQDI--KVSVAGPMTGGESAFGRQLKNGAEQAVVDLNAKGGLL 62

Query: 72  GKKLELVVYDDQGKPEQAVPIANRMVGDGVRAVVSAGFSGPSRAAAPVFQRAKIPYIAAI 131
           GKKL L V DD   P+QA  +A ++ GDG+  V     S  S  A+  +    +  I   
Sbjct: 63  GKKLVLDVEDDACDPKQARSVAEKIAGDGIPFVAGHFCSSSSIPASEAYADGNVLQITPA 122

Query: 132 AFAPEITRTGNY-MFRVTSVGEVQGRAAAKLMGDVLHKKRAVLLTIKTDFGKTLAAGFKE 190
           +  P  T    + + RV    + QG  AA+ +      K   +L  KT +GK LA   K+
Sbjct: 123 STNPLFTERKLWNVLRVCGRDDQQGLVAAEYILKNYKGKNVAILNDKTTYGKGLADETKK 182

Query: 191 AAPKFGVQLLKEYEYAPSDRQFGPLIASIKADNPDVIYATGFYFTAGPLVAQLRSAGVTA 250
           A  K G Q      Y   D  F  +++ +K D  D++Y  G++  AG ++ Q+R  G++ 
Sbjct: 183 ALNKAGFQEKMFESYNKGDNDFNSIVSRLKRDAIDLVYIGGYHREAGLILRQMRDQGLST 242

Query: 251 DVVGAESLSSQQYIDIAGQAAEGTVITNVIDWGSQLPEIADFLKAYEKATNSKAEAAATS 310
            ++  ++++ +++  I G  A GT+ T   D  ++ P     ++ + K      E     
Sbjct: 243 VMMAGDAMNDKEFASITGPLAAGTLFTFGPDPRNK-PTAKQIVETF-KGKGIDPEGYTLY 300

Query: 311 THAAVVALAAAIRKAKSDDPDKIRAALETLDVTTAIGRISFNKLHEVK 358
           T+AA    + A+ KAKS DP K+   ++  D  T +G+++F+   ++K
Sbjct: 301 TYAAFQVWSQAVEKAKSTDPKKVIETIKAGDWDTVLGKMAFDAKGDIK 348