Pairwise Alignments

Query, 530 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  158 bits (399), Expect = 5e-43
 Identities = 150/529 (28%), Positives = 238/529 (44%), Gaps = 53/529 (10%)

Query: 8   RSLARQAAVAAIAVLAAWTVAAQPRQGGTLTWLVNPVPASIVPLTTTAGGNAEIGPKIVE 67
           RS    AA+A     AA   A  P     +  +  P   S+ P T TA  +  I   + +
Sbjct: 6   RSAIALAALAFAGAAAAPAAAQTPPDVLVVGQIAEP--QSLDPHTVTATNDFRILVNVYD 63

Query: 68  GLLTY-DYDLKPKPLLATAWSQSKDGLQYTFELRKGVKWHDGKDFTSADVAFSI-LTLKQ 125
           GL+ + D  L+ +P LA +W  S DG  YTF LR+GVK+HDG +F +  V F+    LK+
Sbjct: 64  GLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKK 123

Query: 126 VHP-RGRG------TFANVVDVKTPDANTAVIVLSKP-SPFLLTALAST---ESPI-VPK 173
            HP    G       FA+V  V   D +T    LS+  +PFL      T    SP+ V K
Sbjct: 124 DHPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEK 183

Query: 174 HLYEGTDIASNKYNSAPVGTGPFVFKEWVQGSHIILERNPNYWDKPKPYLDRVVVRFVLD 233
           H          +Y  +P GTGPF F EW+    +++ERNP+YWD     L  VV R + D
Sbjct: 184 H--------GKEYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAK-LQAVVFRPITD 234

Query: 234 SAARAAALESGAADLANGTGGIPLSDVERFGKLPGVQIDTRISPYLGSHQQIYFNLDTPA 293
           +  R A + +G  D+      +P  ++  F +     +  +  P++        N     
Sbjct: 235 ANTRVAEMMAGGIDV---MVEVPPDNLATFEQDANFAVAEQAGPHVWF---TILNTKQGP 288

Query: 294 LQKLEVRRAIAQAIDVNAFAKTVWYGYGTLSASPIGKGISRYHDASIQPYPFNPKEAEAA 353
                VR+A   A++       V  G  T++A PI    + + ++S++PY  +P++A+A 
Sbjct: 289 FADKRVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFN-WVESSVEPYAHDPEKAKAL 347

Query: 354 LDAAG-------FKRGAGGTRLKLRVLYNPFQERRAADFVRQSLGRIGIDATVESYDFAT 406
           L  AG       F    GG+      + +P     A   ++  L  +G    +E+Y++ T
Sbjct: 348 LAEAGVENPQVTFYVTEGGSG-----MLDPITMGAA---IQADLQAVGFKVKIETYEWNT 399

Query: 407 Y---VTKAYTDRAFDITLESLTNLFDPTVGVQRVFWSKNFKVGLPFSNAAHYVNPEVDRL 463
           +   V      +A    +  +TN  D    +     +   K G    N+ +Y NP++D L
Sbjct: 400 FLGRVNPGLEGKADMAEMAWMTNDPDTVPYLTLRTDAMPDKGGF---NSGYYSNPQLDEL 456

Query: 464 LEAAAVEVDEGKRRQLFVDFQNIVHRDIPSIELGANPAITVATKKVRDY 512
           LE A    D+ +R +L+ + Q+IVH D P + +       V T  V+ +
Sbjct: 457 LEKARRSTDQAERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKGF 505