Pairwise Alignments

Query, 554 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  140 bits (353), Expect = 1e-37
 Identities = 132/492 (26%), Positives = 207/492 (42%), Gaps = 29/492 (5%)

Query: 41  LALAALPFAAAAQTPVEGGT----LTYAVSQEPTSLVSFLDTKTDNRNVSAKVTEGLLRY 96
           +ALAAL FA AA  P    T    L      EP SL     T T++  +   V +GL+R+
Sbjct: 9   IALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVNVYDGLVRF 68

Query: 97  -DAKFTPQPLLATAWQVSPDGLKYSFKLRPGVKFHDGHDFTAEDVRYSVLTQKKQ----- 150
            D     +P LA +W++S DG  Y+F LR GVKFHDG +F AE V+++     K+     
Sbjct: 69  KDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKDHPFY 128

Query: 151 --GPRG-RITLANVERVDTPDPLTAVIVLSRP-APFLLKSLSSAELPIVPAHRYSDGEPL 206
             GP       A+V+ V+  D  T    LS   APFL        L + P      G+  
Sbjct: 129 DTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEKHGKEY 188

Query: 207 GNPNITAPVGTGPFVFEQWVRGSHLVLRKNPNYWRKGYPHLDRVIVKFVRDPAAISTAVE 266
           G     +P GTGPF F +W+    +V+ +NP+YW      L  V+ + + D       + 
Sbjct: 189 GR----SPSGTGPFKFVEWLSNQRVVVERNPDYWDSA-AKLQAVVFRPITDANTRVAEMM 243

Query: 267 TGEVDVAQGVGLADLERLAGNPKLKVDDTYDGFLNNASFLEFNVDNPVLANPKVRHAIAQ 326
            G +DV   V   +L     +    V +       +  F   N      A+ +VR A   
Sbjct: 244 AGGIDVMVEVPPDNLATFEQDANFAVAEQAG---PHVWFTILNTKQGPFADKRVRQAANY 300

Query: 327 AIDRNFIRNTIYYKRVEVVNSPIPRVLSDYYDDSTFRYPFDVAAANRLLDEAGQPKQANG 386
           A+++  + + +      V   PIP    ++ + S   Y  D   A  LL EAG       
Sbjct: 301 AVNKQTLVDDVLRGTATVAAGPIPPAF-NWVESSVEPYAHDPEKAKALLAEAG----VEN 355

Query: 387 QRFSLRLSYIPGAEFKRTT--DYLRSALARVGIKVEVVDGDLPTFLKHVYSTRDFDININ 444
            + +  ++          T    +++ L  VG KV++   +  TFL  V    +   ++ 
Sbjct: 356 PQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPGLEGKADMA 415

Query: 445 GLGRLFDPTVGVQRIYWGDGVRNPLIWINAAHYDNPQVDELFRQAAVELDTGKRAAQFKQ 504
            +  + +    V  +             N+ +Y NPQ+DEL  +A    D  +R   + +
Sbjct: 416 EMAWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARRSTDQAERGKLYGE 475

Query: 505 IQQIVGRELPVL 516
           +Q IV  + P L
Sbjct: 476 VQSIVHDDAPWL 487