Pairwise Alignments

Query, 554 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 492 a.a., glutathione-binding protein GsiB from Phaeobacter inhibens DSM 17395

 Score =  162 bits (409), Expect = 4e-44
 Identities = 146/511 (28%), Positives = 226/511 (44%), Gaps = 45/511 (8%)

Query: 42  ALAALPFAAAAQTPVEGGTLTYAVSQEPTSL-VSFLDTKTDNRNVSAKVTEGLLRYDAKF 100
           ALA L  AAAA+      T+T A+  EP  L  +       ++ + + V EGL R+    
Sbjct: 13  ALAILAGAAAARD-----TVTVALQLEPPHLDPTSAAAGAIDQVLYSNVFEGLTRFMGDG 67

Query: 101 TPQPLLATAWQVSPDGLKYSFKLRPGVKFHDGHDFTAEDVRYSVLTQKKQGPRG--RITL 158
           +  P LA +W +S DGL Y+F L+ GV FHDG    AEDV++S+   + +      +   
Sbjct: 68  SVVPGLAQSWGISEDGLSYTFTLQDGVTFHDGTTMDAEDVKFSLDRARAEDSTNAQKALF 127

Query: 159 ANVERVDTPDPLTAVIVLSRPAPFLLKSLSSAELPIVPAHRYSDGEPLGNPNITAPVGTG 218
           A++  VD  DPLT  + LS+P   LL +L+  +  IV        +       TAPVGTG
Sbjct: 128 ADIASVDVVDPLTVKLTLSQPNGNLLFNLAWGDAVIVAPETIDTIK-------TAPVGTG 180

Query: 219 PFVFEQWVRGSHLVLRKNPNYWRKGYPHLDRVIVKFVRDPAAISTAVETGEVDVAQGVGL 278
            F F  WV+G  + L +NP+YW +  P L     KF+ DP A   A+   ++D       
Sbjct: 181 AFTFTNWVQGDRIDLARNPDYWGEA-PALSAATFKFISDPTAAFAAMMAEDIDAFSAFPA 239

Query: 279 AD-LERLAGNPKLKVDDTYDGFLNNASFLEFNVDNPVLANPKVRHAIAQAIDRNFIRNTI 337
            + L +   +P+ +V     G     + L  N       NPKVR A+A AIDR  I +  
Sbjct: 240 PENLPQFEADPRFQV---LIGSTEGETILSINNKQAPFDNPKVRAAVAHAIDRQAIIDGA 296

Query: 338 YYKRVEVVNSPIPRVLSDY---YDDSTFRYPFDVAAANRLLDEAGQPKQANGQRFSLRLS 394
            +       +PI    + +   Y D T     D   A  LL EAG    A+G  F+  L 
Sbjct: 297 MFG----YGTPIGSHFAPHNPAYIDLTGTSAHDPEKARALLAEAG---LADG--FTTTLH 347

Query: 395 YIPGAEFKRTTDYLRSALARVGIKVEVVDGDLPTFLKHVYSTRDFDININGLGRLFDPTV 454
             P +  +R  + + + LA VGI  E+++ +   +L+ V+  ++F ++I       D  +
Sbjct: 348 LPPPSYARRGGEIIAAQLAEVGITAEIINVEWAQWLETVFRGKNFGLSIVSHTEPMDIGI 407

Query: 455 GVQRIYWGDGVRNPLIWINAAHYDNPQVDELFRQAAVELDTGKRAAQFKQIQQIVGRELP 514
             +  Y+               YDN    +L  +     D   R    +Q Q+I+  +  
Sbjct: 408 YARPDYY-------------FQYDNAAFQDLMAELTGTTDPDARTKMLQQAQEIIANDYV 454

Query: 515 VLPLVSVPLIQVYSARVHNLNNSIDLMAGDL 545
              L  +  + V  A +  L  +    A DL
Sbjct: 455 NGYLFQLAALSVAKADLQGLWANAPTQATDL 485