Pairwise Alignments

Query, 554 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 567 a.a., ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  145 bits (367), Expect = 3e-39
 Identities = 142/501 (28%), Positives = 217/501 (43%), Gaps = 58/501 (11%)

Query: 82  NRNVSAKVTEGLLRYDAKFTPQPLLATAWQVSPDGLKYSFKLRPGVKFHDGHDFTAEDVR 141
           + NV+  +   L+ +D+     P LA +W VSPD   Y+ KLRP + F DG   TAEDV 
Sbjct: 85  DENVTNVIFSRLIDWDSHGKLVPGLAESWTVSPDNKVYTIKLRPNLTFSDGSPLTAEDVA 144

Query: 142 YS--VLTQKKQGPRGRITLAN--------------VERVDTPDPLTAVIVLSRPAPFLLK 185
           ++  VL   K      ITLAN              V  +   DPLT  +  ++P    L 
Sbjct: 145 FTLTVLLDPKYDGDTDITLANIAGGADYKAGKADSVSGLKVVDPLTLQVTTTQPGATTLA 204

Query: 186 SLSSAELPIVPAHRYSDGEPLGNPNITA-----PVGTGPFVFEQWVRGSHLVLRKNPNYW 240
            +     P++    Y  G   GN +        P+G GP+V+++++ G  +    N +++
Sbjct: 205 KIGG---PVLSKAYYGKGYQRGNLDYLRTLHGKPLGNGPYVYDKYIPGQEIRFHANSHFY 261

Query: 241 RKGYPHLDRVIVKFVRDPAAISTAVETGEVDVAQGVGLAD-LERLA----GNPKLKVDDT 295
           R+  P   R I + V +P+      +TGE D        D +E+L      N  L     
Sbjct: 262 RRT-PPTPRFIYR-VTNPSTNFQLFQTGETDYDAFTSRPDDIEQLKMLGFANINLYGSSD 319

Query: 296 YDGFLNNASFLEFNVDNPVLANPKVRHAIAQAIDRNFIRNTIYYKRVEVVNSPIPRVLSD 355
           Y       S +EFNV  P L + KVR A+   +DR  + + +Y    +V   PI  +   
Sbjct: 320 Y-------SQVEFNVRRPALQDVKVRQALIYGLDRQKLIDVVYQGYGKVAIEPIAPISWA 372

Query: 356 YYDDSTFRYPFDVAAANRLLDEAGQPKQANGQRF--SLRLSYIPGAEFKRTTDYL----R 409
           Y  D    Y +D A A +LLDEAG    A+G R     RL        K   D L    +
Sbjct: 373 YNADGVNPYHYDPAQAKKLLDEAGWKPGADGIRVKEGKRLELTLLVSKKVLNDALIPIAK 432

Query: 410 SALARVGI--KVEVVDGDLPTFLKHVYSTRDFDININGLGRLFDPTVGVQRIYWGDGVRN 467
               ++G+  K +VVD +    L     + ++D+       L DP  GV   Y  +    
Sbjct: 433 ENWQQIGVLLKPQVVDFNA---LMAQRKSGNYDLASFSTSTLNDPHDGVWDFYSAEA--- 486

Query: 468 PLIWINAAHYDNPQVDELFRQAAVELDTGKRAAQFKQIQQIVGRELPVLPLVSVPLIQVY 527
                  + Y+NPQVD+L  +    LD  KR   + Q+ Q++ ++ PV+ L    ++   
Sbjct: 487 -----KESGYNNPQVDKLITEGNSVLDVEKRKPIYHQLYQVLAQDPPVILLGYREILSAS 541

Query: 528 SARVHNLNNSI-DLMAGDLAD 547
           SARV      I + + G L D
Sbjct: 542 SARVSGFKPDIYNGLTGSLPD 562