Pairwise Alignments

Query, 542 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  149 bits (377), Expect = 2e-40
 Identities = 152/507 (29%), Positives = 226/507 (44%), Gaps = 48/507 (9%)

Query: 18  ASLGVAALAGPMPAWAQAPAAGSPVRGGTLTVLIDPEPPTLTTIAHSAGSSVLISAKTTE 77
           +++ +AALA    A A A A   P     L V    EP +L     +A +   I     +
Sbjct: 7   SAIALAALAFAGAAAAPAAAQTPP---DVLVVGQIAEPQSLDPHTVTATNDFRILVNVYD 63

Query: 78  GLLTY-DFDLSPQPQLATAWTVSADGLQYTFTLRRGVRWHDGKPFTSADVAHSIG-LLKQ 135
           GL+ + D  L  +P LA +W +S DG  YTFTLR+GV++HDG  F +  V  +   +LK+
Sbjct: 64  GLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKK 123

Query: 136 YHPRGRA-------TFSSVAEVRTPDAYTAVLVLSKPVPYLLTALSASESPIV-PRHLYE 187
            HP            F+SV  V   D +T    LS+     L+ L+     IV P  + +
Sbjct: 124 DHPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEK 183

Query: 188 SGKADANPANNAPIGTGPFVFKEWVRGSHVTYERNPDYWDNPKPYVDRLIVRFIPDAAAR 247
            GK        +P GTGPF F EW+    V  ERNPDYWD+    +  ++ R I DA  R
Sbjct: 184 HGK----EYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAK-LQAVVFRPITDANTR 238

Query: 248 AAAIEKGEVHLSPGTPVPLGDVERLRAKPNL-VFEPNGYQYINNVSRVEFNLENPALQDL 306
            A +  G + +     VP  ++       N  V E  G     +V     N +     D 
Sbjct: 239 VAEMMAGGIDVM--VEVPPDNLATFEQDANFAVAEQAG----PHVWFTILNTKQGPFADK 292

Query: 307 RVRQAIAHAINRQVVQKTVWYGQGQLIPGPVHPALRKFYVPDLPVLPHDVKRAEALLDAA 366
           RVRQA  +A+N+Q +   V  G   +  GP+ PA   +    +    HD ++A+ALL  A
Sbjct: 293 RVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAF-NWVESSVEPYAHDPEKAKALLAEA 351

Query: 367 GFVRGKAGGNLRLKLAVVPISNEGGQRTAE------YLKQSLGRIGIEVTIHSQDFATYV 420
           G    +          V     EGG    +       ++  L  +G +V I + ++ T++
Sbjct: 352 GVENPQ----------VTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFL 401

Query: 421 RRV---YADRAFDLHVSVMSNTFDPTVGIQRLYWSKNFKKGLPFSNGSGYSNPEVDRLLE 477
            RV      +A    ++ M+N  D TV    L       KG  F++G  YSNP++D LLE
Sbjct: 402 GRVNPGLEGKADMAEMAWMTNDPD-TVPYLTLRTDAMPDKG-GFNSGY-YSNPQLDELLE 458

Query: 478 AAAVEIDEGRRRQAFAEFQRHIVRDLP 504
            A    D+  R + + E Q  +  D P
Sbjct: 459 KARRSTDQAERGKLYGEVQSIVHDDAP 485