Pairwise Alignments

Query, 1160 a.a., Transcription-repair coupling factor from Variovorax sp. SCN45

Subject, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (589), Expect = 1e-64
 Identities = 149/381 (39%), Positives = 207/381 (54%), Gaps = 19/381 (4%)

Query: 607 FQETADQKAAIHAVVQDMISPQPMDRLVCGDVGFGKTEVALRAAFIAVTGGKQVAFLAPT 666
           F  T  Q+  +  +  D+  P PM RLV GDVG GKT VA  AA  A+  G QVA +APT
Sbjct: 266 FSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSGKTLVAALAAVRAIEHGYQVALMAPT 325

Query: 667 TLLAEQHYQTLVDRFAKWPVKVAEMSRFRSAKEITAAAKGLAEGQVDIVVGTHKLLSQSV 726
            LLAEQH            ++V  ++     K        +A G+V +VVGTH L  + V
Sbjct: 326 ELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKARETELARIASGEVKMVVGTHALFQEQV 385

Query: 727 KFKNLGLLIIDEEHRFGVRHKEAMKAMRAEVDV----LTLTATPIPRTLGMALEGLRDLS 782
            F +L L+IIDE+HRFGV  +  ++   A+       L +TATPIPRTL M      + S
Sbjct: 386 SFDHLALVIIDEQHRFGVHQRLELREKGAKQGAYPHQLIMTATPIPRTLAMTAYADLETS 445

Query: 783 VIATAPQRRLAIKTFV-----RNEGTGVIREAVLRELKRGGQVYFLHNEVETIENRR--- 834
           VI   P  R  I+T       R+E    IR A L E K+   V  L +E E +E +    
Sbjct: 446 VIDELPPGRTPIQTVAIPDTKRDEIVERIRHACLNEGKQAYWVCTLIDESEVLEAQAAAE 505

Query: 835 --QKLEEILPEARIAVAHGQMPERELERVMRDFVAQRYNLLLCSTIIETGIDVPTANTIV 892
             ++L+  LPE +I + HG+M   E + VM+ F     +LL+ +T+IE G+DVP A+ ++
Sbjct: 506 TAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKNNELHLLVATTVIEVGVDVPNASLMI 565

Query: 893 MSRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDTEGLTKQAAQRLDAIQQMEELGSGFY 952
           +   ++ GLAQLHQLRGRVGR    ++  L+      L+K A +RL  ++   E   GF 
Sbjct: 566 IENPERLGLAQLHQLRGRVGRGTVASHCVLLF--HAPLSKTAQKRLGVLR---ESNDGFV 620

Query: 953 LAMHDLEIRGTGEVLGESQSG 973
           +A  DLEIRG GE+LG  Q+G
Sbjct: 621 IAQRDLEIRGPGELLGTKQTG 641