Pairwise Alignments

Query, 398 a.a., Translation elongation factor Tu from Variovorax sp. SCN45

Subject, 428 a.a., translation elongation factor EF-1 subunit alpha from Methanococcus maripaludis S2

 Score =  166 bits (419), Expect = 2e-45
 Identities = 138/437 (31%), Positives = 201/437 (45%), Gaps = 55/437 (12%)

Query: 1   MMNNKVHVNVGTIGHVDHGKTTLTAALTFVQAA-------RFGGDALSYGQ--------I 45
           M   K  +NV  IGHVD GK+T    L     A       R   +A   G+        +
Sbjct: 1   MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVM 60

Query: 46  DNAKEERERGITINTSHVEYESDRRHYAHIDCPGHADYIKNMITGASQMDGAILLV---D 102
           D  KEERERG+TI+ +H ++ + +     +DCPGH D+IKNMITGASQ D A+L+V   D
Sbjct: 61  DGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDD 120

Query: 103 GTEGAARQTIEHVLLARQVNVGHMVVFVNKMDLVADGDRADIEQLIEMEIGALLAAHGYH 162
              G   QT EHV L+R + +  + V +NKMD V +   AD  ++ +M    LL   G++
Sbjct: 121 AKSGIQPQTREHVFLSRTLGITQLAVAINKMDTV-NFSEADYNEMKKMLGDQLLKMVGFN 179

Query: 163 DACFVFGSALKALVAAERGDLEGAEVQCIVELVNALDSRIPDPVRDYDAPFMMPVEGVHT 222
                F      L        E         L   +D   P P +    P  +P++ V++
Sbjct: 180 PDNIDFIPVASLLGDNVFKKSENTPWYNGPTLAQVIDGFQP-PEKPTTLPLRLPIQDVYS 238

Query: 223 ITGRGTVISGRVERGVIRVGDNLEIVGLSAAGDEKVVVTGVQSFHKDVAEARAGMNVGLL 282
           ITG GTV  GRVE G+I+ GD +      A G+ K     V+  H+ +  A  G N+G  
Sbjct: 239 ITGVGTVPVGRVETGIIKPGDKVVFEPAGAVGEIKT----VEMHHEQLPSAEPGDNIGFN 294

Query: 283 LRGVKRDDVVRGQVV---VKPGALKPYRTGRAQIFVLSKDEGGRHTPFGSGYQPQFFFGT 339
           +RGV + D+ RG V+     P  +    T  AQI VL        +    GY P F   T
Sbjct: 295 VRGVGKKDIKRGDVLGHTTNPPTVAADFT--AQIVVLQ-----HPSVMTVGYTPVFHAHT 347

Query: 340 TDV--------------TGVIRVDTDTGMVEPGAQAQIGFELNKPVAIENGM------RF 379
             +              TG + ++ +   ++ G  A +     KP+ +E+        RF
Sbjct: 348 AQIACTFMELQKKLNPATGEV-LEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRF 406

Query: 380 AMREGGKTVGAGIVTEV 396
           A+R+ G TV AG+  +V
Sbjct: 407 AIRDMGMTVAAGMAIQV 423