Pairwise Alignments

Query, 227 a.a., Sensor protein from Variovorax sp. SCN45

Subject, 216 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 80.5 bits (197), Expect = 2e-20
 Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 6/199 (3%)

Query: 27  ILVVDDHELVRLGLRALLLAETG-SVPVHEARCLSDALRLYEFHLTSHLLVLLDLDLPDS 85
           I++ DDH L R  L+  L    G +V + EA  +++ L  +        LVLLDL++P +
Sbjct: 6   IIIADDHPLFRSALQQALTMGLGENVRLVEAASIAE-LETFLNQGADWDLVLLDLNMPGA 64

Query: 86  QGLDTLMRFRRAFPASRVVVLSGKDSHALMHGATALGAQAFLPKTGHLG---EVLRYVRD 142
            G   L+  R  +P   VV++S ++  A++  +   GA  F+PK+  L    E +R V D
Sbjct: 65  YGFSGLVLLRGQYPHLPVVMISAQEDAAVVARSREFGASGFIPKSSSLETIQEAVRAVLD 124

Query: 143 NDLAALPLAMPAAPAAVRTTASTAELQPQLNARQVEILDWLLAGKSNKEIAQLSNLTEGT 202
            D+         A  +    A++A L   L  +Q  +L  +  G  NK+IA   N++E T
Sbjct: 125 GDVWWPSNIQDVANVSDEAKAASAGLA-SLTPQQFRVLTMVCDGLLNKQIAYELNVSEAT 183

Query: 203 VKNHVSTLLLLFGMRSRAQ 221
           +K HV+ +    G+R+R Q
Sbjct: 184 IKAHVTAIFRKLGVRTRTQ 202