Pairwise Alignments

Query, 593 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 747 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  180 bits (456), Expect = 2e-49
 Identities = 131/390 (33%), Positives = 199/390 (51%), Gaps = 16/390 (4%)

Query: 201 EKEALAEQLSHQIAATQRASEEKTRFLAAASHDLRQPLHAIALFGAVIEKKLKGSDEWDH 260
           E+  +   L H   A + A   KTRFLAAASHDL QP++A  L+ +++  K+      + 
Sbjct: 363 EQTKIEAALRHAKEAAEAAHTSKTRFLAAASHDLLQPINAAKLYLSMLTDKVGQPGTEEV 422

Query: 261 AVRLMDAVGTLGDSLDILLDISRLDAGEVAPQVRPVELNPLFLALNNVFVAQAADLDLQL 320
             RL  +  ++   L  LLDISRLD+      V    L  L   +       A +  + L
Sbjct: 423 VRRLKRSFTSIESLLQALLDISRLDSSGAEFNVTSFNLGNLLQGVAEDLAPLATERGIDL 482

Query: 321 RLRATPCWVLSDPQLLQRLLSNLVHNALKYTTRGGVVVAARARGPLVWIDVCDTGIGIAD 380
           R+  +  WV SD + L R + NLV NA++YT RG V+V  R  G  V I+V DTG+GI++
Sbjct: 483 RIVPSSRWVSSDQRYLMRCVQNLVVNAIQYTERGRVLVGCRLTGDAVRIEVWDTGVGISE 542

Query: 381 EHLGRIFDEFYQIDNPGRDRTKGLGIGLSIVQRLSRLLAHPLQVRSRLHHGSRFRLVLPA 440
           E   RIF EF +    G  +  G+G+GLSIV+R  R L HP+++ S+   GS F + +P 
Sbjct: 543 EDRTRIFKEFTRAS--GAAKGPGMGLGLSIVERACRHLDHPIRLASQPGRGSVFSIEVP- 599

Query: 441 VTALGSPPLAALPGAPLPLPRR-------VLVIDDEAAIRQAVAGLLQAHGLSVDAVASE 493
              L +P  A++   P   P         V++++++A    A+  +L++ G SV A  S 
Sbjct: 600 ---LAAPGHASVSEDPRMEPMLDGSLDLIVMIVENDADELHAMTQVLESWGASVLAADST 656

Query: 494 ADAEAVLAHAAHGSTPVEVLLCDVRLADGADGLAAAQRLRARFGPGLQVLLITGETAPQR 553
           ADA A++     G+ P ++LL D +L D  +G+     LRA  G  +  ++I+     Q 
Sbjct: 657 ADAAALMQEI--GTAP-DILLVDYQLDDEDNGIETIHTLRALAGAEIPAIIISANRQRQF 713

Query: 554 QRQMRDSGLQVLLKPVAADRLLQALASLTR 583
            +   +    VL KPV   RL   +   TR
Sbjct: 714 LQLCNEMSFAVLTKPVQLVRLRALIDWKTR 743