Pairwise Alignments

Query, 593 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 817 a.a., PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  239 bits (609), Expect = 4e-67
 Identities = 154/398 (38%), Positives = 224/398 (56%), Gaps = 21/398 (5%)

Query: 192 LTASLTMRFEKEALAEQLSHQIAATQRASEEKTRFLAAASHDLRQPLHAIALFGAVIEKK 251
           L    T R E EA        +A  + AS  K+RFLAAASHDLRQP+ A+ ++  ++ ++
Sbjct: 413 LLLDTTKRVEVEAAVRDA---LARAEAASTSKSRFLAAASHDLRQPMQALNIYVGLLTRQ 469

Query: 252 LKGSDE-WDHAVRLMDAVGTLGDSLDILLDISRLDAGEVAPQVRPVELNPLFLALNNVFV 310
           ++     ++   R+  +V  LGD LD LLD+S+LDAG V    +P  +N +   ++    
Sbjct: 470 VREQPRAYELVQRVGQSVNALGDLLDSLLDVSKLDAGIVTAAPQPFAVNNILERMDTEMR 529

Query: 311 AQAADLDLQLRLRATPCWVLSDPQLLQRLLSNLVHNALKYTTRGGVVVAARARGPLVWID 370
                  L+ R+  +     SD  L++R+L NLV NA +YT  GGVV+  R RG  V   
Sbjct: 530 PLFEAKGLRFRVVKSALMACSDDTLVERILRNLVTNAYRYTQSGGVVLGCRRRGGTVVFQ 589

Query: 371 VCDTGIGIADEHLGRIFDEFYQIDNPGRDRTKGLGIGLSIVQRLSRLLAHPLQVRSRLHH 430
           V D+GIGI  + L  IF+EFYQ+ N GRDR +GLG+GL+IV+RLS+LL HP+ VRS +  
Sbjct: 590 VWDSGIGIPADRLDLIFEEFYQVGNQGRDRAQGLGLGLAIVRRLSQLLGHPVAVRSEVGR 649

Query: 431 GSRFRLVLP---------AVTALGSPPLAALPGAPLPLPRRVLVIDDEAAIRQAVAGLLQ 481
           G+ F + LP         AVT+  +  L A+    L      +VIDD++A+   +A LL+
Sbjct: 650 GTMFEVALPQASPEEMEAAVTSWTATGLPAIRDGTL-----AVVIDDDSAVLDGMALLLE 704

Query: 482 AHGLSVDAVASEADAEAVLAHAAHGSTPVEVLLCDVRLADGADGLAAAQRLRARFGPGLQ 541
             G   D VA++   EA  A       P  V++ D RL  G  G+AA Q LR  FG  + 
Sbjct: 705 DWGF--DVVAAQDMLEAFEALRGSPKAPA-VIIADYRLQAGGTGVAAVQSLRQAFGVTIP 761

Query: 542 VLLITGETAPQRQRQMRDSGLQVLLKPVAADRLLQALA 579
            +++TG+T+P+R R++  SG ++L KPV    L  ALA
Sbjct: 762 GVIVTGDTSPERLREVTASGFRLLHKPVRTFDLRAALA 799