Pairwise Alignments

Query, 282 a.a., ABC-type amino acid transport/signal transduction system, periplasmic component/domain from Variovorax sp. SCN45

Subject, 268 a.a., amino acid ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 11  SSRIAIALAAVLCIGAGAAHADATLDRIKQRGKVAIGVMVNGGPFGSIDPATQQLIGWNP 70
           +S +A  L A   +    AHAD  LD I   G +   V+++  P GS D   +  IG++ 
Sbjct: 3   TSVLAFGLVAATAL-TSPAHADK-LDDIIASGTLRCAVVLDFPPMGSRDENNEP-IGFDV 59

Query: 71  DLARDLAKQLGAEVELVQVQPSNRVQFLQSGKVDLLIASMEYNADRGEILGYAPTPFYRV 130
           D   DLA  LG   E+V+     R+  L SG+VD+ +AS     +R + +G    P++  
Sbjct: 60  DYCNDLATALGVTAEIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGMT-VPYFAF 118

Query: 131 GGTAAVLKTSGVAKWEDLRGKIVCASQGSSFVKPLQEQYGA----QVRGFKTSSESLLAL 186
                  + SG+  +ED++GK+V A+ G+     L+ Q  A    + R ++T ++  LAL
Sbjct: 119 EMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEGEFRPYQTQADVFLAL 178

Query: 187 RGGNCVAAVHDSTLIQ 202
             G   A V  ST+ Q
Sbjct: 179 SQGQLDATVSTSTVAQ 194