Pairwise Alignments

Query, 274 a.a., ABC-type amino acid transport/signal transduction system, periplasmic component/domain from Variovorax sp. SCN45

Subject, 304 a.a., Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) from Pseudomonas fluorescens FW300-N2E2

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 29/275 (10%)

Query: 21  AHADATLDKIKQRGKLTVGVILSGPPFGTIDPATQKPVGYNVELAEGVAKGLGVGLETVQ 80
           A    TL KIK+ G +T+G   +  PF  I  A+ KPVGY+ ++   V + L   L+   
Sbjct: 24  AELTGTLKKIKESGVITLGHRDASIPFSYIADASGKPVGYSHDIQMKVVEALKKDLDLPN 83

Query: 81  VQ-------PSNRVQFLQQGKVDILIANMQWTQERSEILSFVPTPFEEVGGAAIARKDSG 133
           +Q          R+  +Q G VD+   +     ER + + F    F E+G   +++KDS 
Sbjct: 84  LQIKYNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVDFSVGIF-EIGTKLLSKKDSK 142

Query: 134 LAKWEDLRGKPVCVSQGSNFTKPLA-----EQYGAQIKAFRGQPESLLALKGGNCVAAVH 188
              ++DL+GK V  + G+   + L      +Q G  + + +   ES   L+ G  VA + 
Sbjct: 143 YKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMM 202

Query: 189 VSPTLRELVTGNADWKDYAIVSPSDLIPSPSVIW---VRKGEADTQAAIDRIVQNWHRTG 245
               L           D+A+       P    I+   +RKG+   + A+D  ++  + +G
Sbjct: 203 DDALLAGEAAKAKKADDWAVTG----TPQSYEIYGCMMRKGDEPFKKAVDDAIKATYASG 258

Query: 246 WLIEVEKKNGMTPT---------PLLHELKAKFAK 271
            + ++ +K  M P          P+  ELKA  AK
Sbjct: 259 EINKIYEKWFMQPIPPKGLNLNFPMSDELKALIAK 293