Pairwise Alignments

Query, 274 a.a., ABC-type amino acid transport/signal transduction system, periplasmic component/domain from Variovorax sp. SCN45

Subject, 265 a.a., ABC transporter periplasmic substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 7/260 (2%)

Query: 5   IFLPLLPMLFLAAGTGAHADATLDKIKQRGKLTVGVILSGPPFGTIDPATQKPVGYNVEL 64
           + LPL+ +L +  G    + ++LD I  R K+ +GV LS PPFG  +   Q P G +V++
Sbjct: 8   LLLPLVGLLAITVGAATASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQ-PDGLDVDV 66

Query: 65  AEGVAKGLGVGLETVQVQPSNRVQFLQQGKVDILIANMQWTQERSEILSFVPTPFEEVGG 124
           A+ +AK LGV LE V V   +R+  LQ GKVD ++A+     ER+  ++F   P+     
Sbjct: 67  AKLLAKDLGVELELVPVTGQSRIPSLQTGKVDFVVASFGIYTERALSVAF-SNPYGGHRS 125

Query: 125 AAIARKDSGLAKWEDLRGKPVCVSQGSNFTKPL--AEQYGAQIKAFRGQPESLLALKGGN 182
             IA K++ +    DL GK V V +G+   K L  A   G ++  F     +L AL  G 
Sbjct: 126 IIIAPKEATIKSLADLAGKRVGVPRGTAHEKILSAANVEGMELVRFDDDSTTLNALVSGQ 185

Query: 183 CVAAVHVSPTLRELVTGNADWKDYAIVSPSDLIPSPSVIWVRKGEADTQAAIDRIVQNWH 242
             A   V+    +L      + D      +  + S   + +R+ + D    ++ ++    
Sbjct: 186 VDAIGTVNYIAAQL---QERYPDRGFEEKTTYLQSFYGVGLRRNDPDLLHWLNTVLFVHK 242

Query: 243 RTGWLIEVEKKNGMTPTPLL 262
           ++G L  + +K   TP P L
Sbjct: 243 QSGELGAIYEKWMKTPIPEL 262