Pairwise Alignments

Query, 274 a.a., ABC-type amino acid transport/signal transduction system, periplasmic component/domain from Variovorax sp. SCN45

Subject, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 89.7 bits (221), Expect = 6e-23
 Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 10/260 (3%)

Query: 4   RIFLPLLPMLFLAAGTGAHADATLDKIKQRGKLTVGVILSGPPFGTIDPATQKPVGYNVE 63
           RI + +L    +A      A  T++ IK  G + VG+++  PPFG +D A  +P GY+ +
Sbjct: 12  RIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMD-ANNQPDGYDAD 70

Query: 64  LAEGVAKGLGVGLETVQVQPSNRVQFLQQGKVDILIANMQWTQERSEILSFVPTPFEEVG 123
           +A+ +AK LGV +  V V   NR+ +LQ  +VD+L+A++  T+ER++ + F   P+  + 
Sbjct: 71  VAKLLAKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDF-SQPYAGIS 129

Query: 124 GAAIARKDSGLAKWEDLRGKPVCVSQGS---NFTKPLAEQYGAQIKAFRGQPESLLALKG 180
                  D  + K EDL GK + V++ S     T  +A Q  A I+ F     ++ AL  
Sbjct: 130 IGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQ-DANIQRFDDDASAVQALLS 188

Query: 181 GNCVAAVHVSPTLRELVTGNADWKDYAIVSPSDLIPSPSVIWVRKGEADTQAAIDRIVQN 240
           G  V  + VS  +   +   A  +    +  S  +     I VRKG ++    ++  +  
Sbjct: 189 GQ-VELIGVSNVVAAQIEAAAPGRFNQKLQLSQQVQG---IAVRKGSSEMLKFVNGFLDK 244

Query: 241 WHRTGWLIEVEKKNGMTPTP 260
               G L  + +K   +P P
Sbjct: 245 VKADGQLNAIHEKWLGSPLP 264