Pairwise Alignments

Query, 240 a.a., 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) from Variovorax sp. SCN45

Subject, 242 a.a., 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  114 bits (285), Expect = 2e-30
 Identities = 88/234 (37%), Positives = 122/234 (52%), Gaps = 19/234 (8%)

Query: 6   LFVLIPCAGSGHRAGHAQSTQPKQYQRLAGLPMVAHTLEAFRALSGRFAGLALVVSPDDR 65
           L  ++P AG G R G   +  PKQY  L   P++AHTL+       R   + + +SP+D 
Sbjct: 8   LVAIVPAAGIGARMG---AEIPKQYLMLNHQPILAHTLDRLLE-HPRIDKVIIALSPEDS 63

Query: 66  DVDAALPRFPAENEYLLRVGGLTRAATVRNGLAALRQKGAGAHDWVLVHDAARCLVSSSQ 125
              A L +  +  + +  +GG  RA +V + L    Q       W LVHDAAR  +S++ 
Sbjct: 64  HF-AKLSQ-ASHPKLMTVIGGKERADSVLSALKVASQSA-----WALVHDAARPCLSAAD 116

Query: 126 IEALIAACEHDA---VGGLLAHRLADTLKVSTTESRVAQTLPRADKWLAQTPQMFRI--- 179
           I+ LIAACE +     G +LA  + DT+K S     + +T+ R + W A TPQ+F +   
Sbjct: 117 IDKLIAACETEEGHQQGAILAMPVRDTMKRSGKGGAIQETVCRENLWHALTPQLFPVISL 176

Query: 180 -GMLLDALERIGDAVTDEAGAIEAIGLSPLLVPGSAQNFKVTYPEDFALAEAVL 232
              L DAL     A+TDEA A+E  G  PLLV G   N KVT+PED  LA   L
Sbjct: 177 KQNLADALAA-QVAITDEASAMEWAGGQPLLVSGRFDNIKVTHPEDLQLAALYL 229