Pairwise Alignments

Query, 248 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 10/227 (4%)

Query: 19  LNYAFLLDLG-ERQAFLRGLLVTLELCLLTIPCSLAAGVAMAAALISGHRWLALPARAFV 77
           ++++FL  L   R   L+GL V++ + LL+I      GV +  AL+ G R +    R + 
Sbjct: 1   MDFSFLDQLWLARIPLLKGLGVSVSISLLSIVVGTVLGVFVGLALVYGFRPVKWIVRGYT 60

Query: 78  EVTRNTPTLVQLYCAFLVLNMLITRQLEGVGGNPLTPFVWVVIVVAIHKGAFHAEALRAG 137
           +  R TP LV +  ++ VL+ +         G  L PF   V+ +A+   +   E +R  
Sbjct: 61  DFIRGTPVLVLVLASYYVLSTI---------GIDLGPFQAGVLALAVFCSSHVGELVRGA 111

Query: 138 IEAVPQVTLEAARSLGFSQRQLLWRVELPLAVRFALPSLVNNLVDLVKMTAVASAIAVGD 197
           ++++P+   EAA+++G +  Q    V  P A+R ALP+ VN   ++VK + + S I V +
Sbjct: 112 LQSIPKGQTEAAKAIGLTFAQTFTYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVSE 171

Query: 198 VTYESIMIWTQRDNVLELLLLILLYFGALTWLVSRAGSWLEARLRMP 244
           +   +  + ++    LE        +  + + + R G ++E +  +P
Sbjct: 172 LLLRTQELISRTFMSLEFYFFAGFLYFVINYGIERFGRYVERKTAVP 218