Pairwise Alignments

Query, 248 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 228 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 95.9 bits (237), Expect = 6e-25
 Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 17/241 (7%)

Query: 7   LAQAVAAIKPLGLNYAFL---LDLGERQAFLRGLLVTLELCLLTIPCSLAAGVAMAAALI 63
           ++   AA     LN+A +    DL      L GL ++L L  + I      G+  A  LI
Sbjct: 1   MSHETAASMTYSLNFAAVWRSFDL-----LLEGLALSLGLAFVAILAGCVIGLITAFGLI 55

Query: 64  SGHRWLALPARAFVEVTRNTPTLVQLYCAFLVLNMLITRQLEGVGGNPLTPFVWVVIVVA 123
           S    L  PA  +V V RNTP LV +  ++  L  L      GV    +  FV     +A
Sbjct: 56  SRRALLRKPAGLYVTVIRNTPILVLVLFSYFALPEL------GVRLGKIESFV---ATLA 106

Query: 124 IHKGAFHAEALRAGIEAVPQVTLEAARSLGFSQRQLLWRVELPLAVRFALPSLVNNLVDL 183
           I+ GA+ AE  R G+ A+P    EA  ++G ++ Q+   + +PL +R  LPSL + ++ L
Sbjct: 107 IYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISL 166

Query: 184 VKMTAVASAIAVGDVTYESIMIWTQRDNVLELLLLILLYFGALTWLVSRAGSWLEARLRM 243
            K T++A+AIAV ++T+E+  I  +   V+E  ++    + A   L++      E RL +
Sbjct: 167 FKDTSLAAAIAVPELTFEARKINVETFRVIETWIVASCLYVATCSLLAALMRAAERRLAV 226

Query: 244 P 244
           P
Sbjct: 227 P 227