Pairwise Alignments

Query, 248 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  100 bits (250), Expect = 2e-26
 Identities = 68/210 (32%), Positives = 113/210 (53%), Gaps = 13/210 (6%)

Query: 34  LRGLLVTLELCLLTIPCSLAAGVAMAAALISGHRWLALPARA--FVEVTRNTPTLVQLYC 91
           L+G  VT++L L+    +LA  VA AA L    R++A+ A A  ++E  R T   VQL+ 
Sbjct: 12  LQGAWVTVQLTLMG--SALAVVVAFAAGLGRLSRFMAVRALATTYIEFFRGTSIFVQLFW 69

Query: 92  AFLVLNMLITRQLEGVGGNPLTPFVWVVIVVAIHKGAFHAEALRAGIEAVPQVTLEAARS 151
            + VL            G  LTP    V+ + ++ GA+ AE +R  ++A+ +   EA  +
Sbjct: 70  VYFVLPF---------AGITLTPLQAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIA 120

Query: 152 LGFSQRQLLWRVELPLAVRFALPSLVNNLVDLVKMTAVASAIAVGDVTYESIMIWTQRDN 211
           L  ++ Q +  + LP A+   LP+  NN ++L+K TAV S I++ D+T+++ ++  Q  +
Sbjct: 121 LNLTRFQAMRHIVLPQALPLMLPTFGNNAIELLKGTAVVSLISLSDMTFQAQVVRAQTGS 180

Query: 212 VLELLLLILLYFGALTWLVSRAGSWLEARL 241
            L     ILL +  + WL+S    WLE R+
Sbjct: 181 TLIPFATILLLYFVMAWLISLGMRWLERRV 210