Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  110 bits (276), Expect = 2e-29
 Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 25/226 (11%)

Query: 44  VALVFLWQWTPALLWGLFTNIKISVLAMALGTVAGLVVGALSLSPLRFLRVVTRWYVQFF 103
           + +V   QWT AL          S +A A G+V GL+V  + +S  R LR+    +++ F
Sbjct: 11  LVIVAAAQWTIAL----------SAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVF 60

Query: 104 RNAPVLV---LIYFTTYVFPFELHLVKWTVPFPDWIKVVLGLALPTSAVVAEIFRGAIQS 160
           +  P+L+   L++F   +F F ++          WI   + LAL  SA + EI+RG I++
Sbjct: 61  QGTPLLMQLFLVFFGMNIFGFAIN---------PWIAATIALALHASAFLGEIWRGCIEA 111

Query: 161 IPSAQWEAAQSLAFRRSEIFRLIVLPQCLRRMLPPWMNLYASITMSTALASLVGAHDVVD 220
           +P  Q EAA +L  R     R ++LPQ  R  + P +     +   T+LAS++G  ++  
Sbjct: 112 VPKGQREAATALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTR 171

Query: 221 TAQIASNTVARTDFTVLVYFTLLGVFFAYCYPIARATRALERRHAR 266
             QI +N    T    LV+ T+  V+F  C+P++   R +E R +R
Sbjct: 172 QGQIINNA---TFSPFLVFGTVAAVYFLLCWPLSLIARRMETRFSR 214