Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 290 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  100 bits (250), Expect = 3e-26
 Identities = 68/222 (30%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 17  PREHPWWTALAAVLLVIGIWV----ATGTTPVALVFLWQWTPALLWGLFTNIKISVLAMA 72
           P+ H   T  A V+L++   +    + G    + V  + + PA+L GL+  + ++V AM 
Sbjct: 24  PKRHIGRTIAAGVVLLLFAGLVRAFSVGQIEWSYVRDFLFAPAILAGLYNTLLMTVAAMG 83

Query: 73  LGTVAGLVVGALSLSPLRFLRVVTRWYVQFFRNAPVLV--------LIYFTTYVFP--FE 122
           LG V G+V+  + +S    L ++   Y+  FR AP L+         + F T+  P  FE
Sbjct: 84  LGIVLGVVIAIMRISGNPVLSLIAIGYIWVFRGAPALLQLMLWFNLALIFPTFGIPGLFE 143

Query: 123 LHLVKWTVPFPDWIKVVLGLALPTSAVVAEIFRGAIQSIPSAQWEAAQSLAFRRSEIFRL 182
              V    PF   +  VLGL +   A  +E+ R  + S+ S Q+EAA+++   + ++ R 
Sbjct: 144 FRTVDVMTPF---VAAVLGLGISQGAYTSEVVRSGLLSVDSGQYEAARTIGMTQMKMLRR 200

Query: 183 IVLPQCLRRMLPPWMNLYASITMSTALASLVGAHDVVDTAQI 224
           IVLPQ +R M+PP  N    +   T+LAS++   +++  AQI
Sbjct: 201 IVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYSEILHNAQI 242