Pairwise Alignments

Query, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  145 bits (367), Expect = 3e-39
 Identities = 145/504 (28%), Positives = 233/504 (46%), Gaps = 42/504 (8%)

Query: 10  IRSALLAALLAAGLAAHA--APPSHSGTLTLLSTSEPTALVTIGNVATPILS---VSAKV 64
           ++   LAA+L+ G+AA A  A   H GTL + +    ++  T+   ++P      ++  +
Sbjct: 2   LKRLTLAAMLSLGVAAGALAAGERHGGTL-VFTAPYGSSFATLDVQSSPNTQEEFITQAI 60

Query: 65  TEGLLKYDYDVN-PQPQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIELLK 123
              L  +D + N P  +LAT   +S DG  +T+ LR+   +H+GK  T+ D+ YS + + 
Sbjct: 61  HRALYSWDSNQNKPVLELATSEEVSEDGKVHTYHLRKNAVFHNGKPLTADDIIYSYKRI- 119

Query: 124 KIHPRGRNTFANLTA-IDTPDKYTA-----ILRLSKPAPYLIR-ALVATETPIVP----- 171
             +P      A+  A I   + Y A     I  L K   + +      T  P  P     
Sbjct: 120 -ANPENAFPGASFIAVIKGAEDYIAGKADEISGLKKIDDHTLEITYTGTINPGFPLMQNT 178

Query: 172 KHIYEGTDPANNPNNNAPIGTGPFKFKEWVRGSHIVYERNNDYWDKPKPFVDQLIVRFVT 231
             IY       +     P+G G F FKE V GS +V E+ + Y+++ +P++D++ +  + 
Sbjct: 179 TVIYPSNVEGESTFGKNPVGLGAFVFKEHVPGSQVVVEKFDKYYEEGRPYLDRINIVLMA 238

Query: 232 DPAAAAVAFETGTVDLGYRTPVPLADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEY 291
           + AA  VAF    +D+    P      +  + +     E     Y+ N+    FN   E 
Sbjct: 239 EDAARDVAFRNKEIDVSILGPTQYQAYQGEEGLKDHLLEV-AEVYTRNI---GFNPAFEP 294

Query: 292 FKNEKVRQAVAHAIDRNVIVK--VVNYGYGQVSYSPIAPGLKAFHDPAPSPYAFDVKKAN 349
           FK+++VRQA+ HAI+  +I++  V N  Y    + PI+    AF D   +PYA+D +KA 
Sbjct: 295 FKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPISS--PAF-DKDKAPYAYDPEKAK 351

Query: 350 ALLDEAGFPKKAGGVRFSVPLDFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIK 409
           ALL EAG+   A G  F V    +P  + G  + + +   L ++GI V  +  + S   +
Sbjct: 352 ALLAEAGY---ADGFEFEVTA--SPNESWGVPIVEAILPMLKKVGITVKPKPVESSTLGE 406

Query: 410 RIYTDRDFAFTHNGASNLFDP-TVGVQRLYWSKNFIKGVPFSNGTHYQNPVVDKLLEDAA 468
            + T+   AF     SNL  P  +   R Y+SK         N T Y +P  DKL E A 
Sbjct: 407 AVTTNNFQAFIW---SNLSGPDPLNALRCYYSKT---AQSACNYTSYASPEFDKLYEAAQ 460

Query: 469 VENDPGKRLKLFKDFQDTVARDVP 492
            E D  K+  L +   + V  D P
Sbjct: 461 QERDSAKQNDLLRQANNIVQDDAP 484