Pairwise Alignments

Query, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  167 bits (424), Expect = 7e-46
 Identities = 150/508 (29%), Positives = 227/508 (44%), Gaps = 54/508 (10%)

Query: 11  RSAL-LAALLAAGLAAH-AAPPSHSGTLTLLSTSEPTALVTIGNVATPILSVSAKVTEGL 68
           RSA+ LAAL  AG AA  AA  +    L +   +EP +L      AT    +   V +GL
Sbjct: 6   RSAIALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVNVYDGL 65

Query: 69  LKY-DYDVNPQPQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIE-LLKKIH 126
           +++ D  +  +P LA  W IS DG TYTFTLRQGVK+HDG +F +  V ++ + +LKK H
Sbjct: 66  VRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKDH 125

Query: 127 PRGRN-------TFANLTAIDTPDKYTAILRLSKP-APYLIRALVATETPIVPKHIYEGT 178
           P            FA++ A++  D++T   +LS+  AP+L      T   + P  +    
Sbjct: 126 PFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAV---- 181

Query: 179 DPANNPNNNAPIGTGPFKFKEWVRGSHIVYERNNDYWDKPKPFVDQLIVRFVTDPAAAAV 238
           +        +P GTGPFKF EW+    +V ERN DYWD     +  ++ R +TD      
Sbjct: 182 EKHGKEYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAK-LQAVVFRPITDANTRVA 240

Query: 239 AFETGTVDLGYRTPVP-LADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEYFKNEKV 297
               G +D+    P   LA  E+                  +V     N     F +++V
Sbjct: 241 EMMAGGIDVMVEVPPDNLATFEQDANFAV------AEQAGPHVWFTILNTKQGPFADKRV 294

Query: 298 RQAVAHAIDRNVIVKVVNYGYGQVSYSPIAPGLKAFHDPAPSPYAFDVKKANALLDEAGF 357
           RQA  +A+++  +V  V  G   V+  PI P    + + +  PYA D +KA ALL EAG 
Sbjct: 295 RQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFN-WVESSVEPYAHDPEKAKALLAEAGV 353

Query: 358 PKKAGGVRFSVPLDFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIKRIYTDRDF 417
                 V F V    + +  D   +   +++ L  +G  V +   + + F+ R+      
Sbjct: 354 ENPQ--VTFYVTEGGSGM-LDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRV------ 404

Query: 418 AFTHNGASNLFDPTVGVQRLYWSKNFIKGVPF-------------SNGTHYQNPVVDKLL 464
              + G     D    +  + W  N    VP+              N  +Y NP +D+LL
Sbjct: 405 ---NPGLEGKAD----MAEMAWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELL 457

Query: 465 EDAAVENDPGKRLKLFKDFQDTVARDVP 492
           E A    D  +R KL+ + Q  V  D P
Sbjct: 458 EKARRSTDQAERGKLYGEVQSIVHDDAP 485