Pairwise Alignments

Query, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 567 a.a., ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  138 bits (347), Expect = 6e-37
 Identities = 127/495 (25%), Positives = 220/495 (44%), Gaps = 45/495 (9%)

Query: 59  SVSAKVTEGLLKYDYDVNPQPQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYS 118
           +V+  +   L+ +D      P LA  W +SPD   YT  LR  + + DG   T+ DVA++
Sbjct: 87  NVTNVIFSRLIDWDSHGKLVPGLAESWTVSPDNKVYTIKLRPNLTFSDGSPLTAEDVAFT 146

Query: 119 IELLKKIHPRGRN--TFANL--------------TAIDTPDKYTAILRLSKPAPYLIRAL 162
           + +L      G    T AN+              + +   D  T  +  ++P       L
Sbjct: 147 LTVLLDPKYDGDTDITLANIAGGADYKAGKADSVSGLKVVDPLTLQVTTTQPGA---TTL 203

Query: 163 VATETPIVPKHIY-EGTDPAN----NPNNNAPIGTGPFKFKEWVRGSHIVYERNNDYWDK 217
                P++ K  Y +G    N       +  P+G GP+ + +++ G  I +  N+ ++ +
Sbjct: 204 AKIGGPVLSKAYYGKGYQRGNLDYLRTLHGKPLGNGPYVYDKYIPGQEIRFHANSHFYRR 263

Query: 218 PKPFVDQLIVRFVTDPAAAAVAFETGTVDLGYRTPVPLADLERLKKVPALRFETKGNSYS 277
             P   + I R VT+P+     F+TG  D    T  P  D+E+LK +        G   S
Sbjct: 264 TPP-TPRFIYR-VTNPSTNFQLFQTGETDYDAFTSRP-DDIEQLKMLGFANINLYG---S 317

Query: 278 SNVTRLEFNLDNEYFKNEKVRQAVAHAIDRNVIVKVVNYGYGQVSYSPIAPGLKAFHDPA 337
           S+ +++EFN+     ++ KVRQA+ + +DR  ++ VV  GYG+V+  PIAP   A++   
Sbjct: 318 SDYSQVEFNVRRPALQDVKVRQALIYGLDRQKLIDVVYQGYGKVAIEPIAPISWAYNADG 377

Query: 338 PSPYAFDVKKANALLDEAGFPKKAGGVRF--SVPLDFNPIGAD---GPRLADYLRSALAR 392
            +PY +D  +A  LLDEAG+   A G+R      L+   + +       L    +    +
Sbjct: 378 VNPYHYDPAQAKKLLDEAGWKPGADGIRVKEGKRLELTLLVSKKVLNDALIPIAKENWQQ 437

Query: 393 IGIAVTVRAQDPSAFIKRIYTDRDFAFTHNGASNLFDPTVGVQRLYWSKNFIKGVPFSNG 452
           IG+ +  +  D +A + +     ++       S L DP  GV   Y ++        +  
Sbjct: 438 IGVLLKPQVVDFNALMAQ-RKSGNYDLASFSTSTLNDPHDGVWDFYSAE--------AKE 488

Query: 453 THYQNPVVDKLLEDAAVENDPGKRLKLFKDFQDTVARDVPDLNLYQPVFITIANQRVHDH 512
           + Y NP VDKL+ +     D  KR  ++      +A+D P + L     ++ ++ RV   
Sbjct: 489 SGYNNPQVDKLITEGNSVLDVEKRKPIYHQLYQVLAQDPPVILLGYREILSASSARVSGF 548

Query: 513 SLTA-DGVESNLADV 526
                +G+  +L DV
Sbjct: 549 KPDIYNGLTGSLPDV 563