Pairwise Alignments

Query, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 530 a.a., peptide ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  130 bits (327), Expect = 1e-34
 Identities = 118/449 (26%), Positives = 194/449 (43%), Gaps = 39/449 (8%)

Query: 79  PQLATKWVISPDGLTYTFTLRQGVKWHDGK------DFTSADVAYSIELLK----KIHPR 128
           P LA  W +S DG  Y F LR+GVK+   K      DF + DV +S    K      H  
Sbjct: 71  PSLAESWEVSEDGKVYIFHLRKGVKFQSNKYFKPSRDFNADDVIFSFMRQKDPQHPYHNI 130

Query: 129 GRNTFAN---------LTAIDTPDKYTAILRLSKPAPYLIRALVATETPIVPKHIYEGTD 179
               ++N         +TAID PD+YT    L+      +  L      I+     +   
Sbjct: 131 SSGNYSNFESLEFGQLITAIDKPDEYTVRFTLAHAEAPFVADLAWYFASILSAEYADAML 190

Query: 180 PANNPN--NNAPIGTGPFKFKEWVRGSHIVYERNNDYWDKPKPFVDQLIVRFVTDPAAAA 237
            A  P   +  PIGTGPFK  ++ + S I++    +YW + K  +D+LI     D +   
Sbjct: 191 KAGTPERVDMDPIGTGPFKLAQYQKDSRILFTAFPEYW-QGKAHIDRLIFSITPDASVRY 249

Query: 238 VAFETGTVDLGYRTPVP-LADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEYFKNEK 296
              E     +    P P  ADL R+K+  A+   +K      N   L FN       N K
Sbjct: 250 AKLEKNECQV---MPFPNPADLPRMKENKAINLMSKA---GLNTGFLAFNTQKAPLDNVK 303

Query: 297 VRQAVAHAIDRNVIVKVVNYGYGQVSYSPIAPGLKAFHDPAPSPYAFDVKKANALLDEAG 356
           VRQA+A AI++  I++ V +G G  + + + PG+ + +      Y +D +KA ALL E+G
Sbjct: 304 VRQALAMAINKPAIIEAVFHGTGTAAKNLLPPGVWSANSQL-KDYEYDPQKAKALLAESG 362

Query: 357 FPKKAGGVRFSVPLDFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIKRIYTDRD 416
                    +++P+   P   +  R+A+ +++  A+IG+   +   +   ++KR+     
Sbjct: 363 VAGPISIDLWAMPVQ-RPYNPNAKRMAEMIQADWAKIGVQTKITTYEWGEYLKRVKDGEH 421

Query: 417 FAFTHNGASNLFDPTVGVQRLYWSKNFIKGVPFSNGTHYQNPVVDKLLEDAAVENDPGKR 476
            A      +   DP      L+  ++   G   SN   +     DK++ +A    D  KR
Sbjct: 422 QAALMGWTTATGDPDNFFGPLFTCQSANGG---SNSAKWCYQPFDKIIAEAKSITDRQKR 478

Query: 477 LKLFKDFQDTVARDVPDL-----NLYQPV 500
             L+   Q  +   +P +      +++PV
Sbjct: 479 EALYLQAQQMMHDQMPAVMIAHSTIFEPV 507