Pairwise Alignments

Query, 308 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 282 a.a., ABC transporter for D-Glucosamine, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2E2

 Score = 72.8 bits (177), Expect = 9e-18
 Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 31/301 (10%)

Query: 1   MTLKPTIHSALIRPFLAIAGLALCAGVAAQSAPPLEGTLKKIKDTGTITVATRGASIPFN 60
           M  +P++    +  FL  A +A   GVA  +   L+  L++    G + V T   + P++
Sbjct: 1   MQRRPSLFKTCV--FLFAATVA-AVGVAQAADSKLDSVLQR----GKLIVGTGSTNAPWH 53

Query: 61  YLDDNNKQAGFAWEIAQRVVDQAKKDLKLAKLEVKTLEVTPQTRIPLVANQTVDLECSST 120
           +   + K  GF  +IA+ V      D +  +  V++ +     RIP +    VD+ C   
Sbjct: 54  FQGADGKLQGFDIDIARMVAKGLFNDPEKVEFVVQSSDA----RIPNLLTDKVDMSCQFI 109

Query: 121 TNNAERQNQVSFSTTFFVVGARLLVRKNSGIKHWSDL--VGKNVVVSA--GTTAERMLRQ 176
           T  A R  QV+F+  ++  G  LL+  NS  K   DL   G +V V+      AE ++ Q
Sbjct: 110 TVTASRAQQVAFTLPYYREGVGLLLPANSKYKEIEDLKAAGDDVTVAVLQNVYAEELVHQ 169

Query: 177 LNEKNKWGINIILAKDINENFLTVETGRAVAATQDD----IILFSNIARARNPADWEVVG 232
              K K    +     ++  +  V +GRA AA  D      ++  N  R R+PA      
Sbjct: 170 ALPKAK----VDQYDSVDLMYQAVNSGRADAAATDQSSVKYLMVQNPGRYRSPA------ 219

Query: 233 VPQQKEAYGCMLRKGDVAFKKLVDGVITGMMRSGEFASLYEKYFLKPIAVK-GSVAVNFP 291
                + Y C +++GD  +   V+  +   M   EF + Y   F +   V+  S A+ FP
Sbjct: 220 YAWSPQTYACAVKRGDQDWLNFVNTTLHEAMTGVEFPT-YAASFKQWFGVELPSPAIGFP 278

Query: 292 M 292
           +
Sbjct: 279 V 279