Pairwise Alignments

Query, 389 a.a., Cystathionine beta-lyase (EC 4.4.1.8) from Variovorax sp. SCN45

Subject, 395 a.a., cystathionine beta-lyase (RefSeq) from Shewanella loihica PV-4

 Score =  270 bits (689), Expect = 7e-77
 Identities = 147/358 (41%), Positives = 209/358 (58%), Gaps = 3/358 (0%)

Query: 21  PPVWRASTVVFDSLDDFVNR-RTRLPDGFSYGTTGTPTQRALETRIAELDGAAHCVVFPS 79
           PPV+RASTVVFD+++D  +  + R      YG  GTPT  A +  IAEL+G     ++PS
Sbjct: 23  PPVFRASTVVFDTIEDMRHATKNRANGAMFYGRRGTPTHFAFQAAIAELEGGVGTALYPS 82

Query: 80  GQAAICSALLALLKKGDHLLMTDAAYGLAKSFAVERLQALGIEVEFYPPRIGAEIERLVR 139
           G AAI  ALL+ LK GDHLLM D AY   +    + L+  GIE  +Y P IG  IE L+R
Sbjct: 83  GSAAISGALLSFLKAGDHLLMVDTAYEPTRDLCDKLLKGFGIETTYYDPLIGDGIEALIR 142

Query: 140 PNTRLIWLESPGTVTMEVEDVPAITAVARARGVLTAIDNTWASPLGFAALAHGVDLCVHA 199
           PNT++++LESPG++T+EV+DVP ++A+A    ++  +DNTWASP+       GVD+ + A
Sbjct: 143 PNTKVLFLESPGSITLEVQDVPTLSAIAHRHNLVVMLDNTWASPINCRPFELGVDISIQA 202

Query: 200 CTKYMGGHSDVLMGSIATNDEGLYKSLRGLQSQMGLAVSPEDCFLVARGLDTMQVRMERQ 259
            TKY+ GHSDV++G+ AT ++  +  LR     MG   S +D +L +RGL T+ VRM + 
Sbjct: 203 ATKYIVGHSDVMLGT-ATANQAHWDQLRENSYLMGQCTSADDIYLASRGLRTLGVRMAQH 261

Query: 260 ATSAQLIAERLATHPLVRRMLFPALPGAPDHALWARDFRQSGCVMSLQLVDGPYNAYRAL 319
             +   +A  LAT P V  +  PA    P H  + RDF  S  + S  L  G   A  A 
Sbjct: 262 EKNGLEVANLLATRPEVDHLRHPAFASCPGHEFFKRDFSASNGLFSFVLKRGNIKAITAF 321

Query: 320 FGHLKLFSIGASWGGVRS-IAAFYPAEELAKRNFCDVQGPVIRLSIGLDDPQALLDEL 376
              +  F +G SWGG  S I   +  ++L      D   P+IRL +GL++P+ L+ +L
Sbjct: 322 VEGMDHFKMGFSWGGYESLILGVFGIDKLRTATQWDSSKPLIRLHVGLENPEDLIKDL 379