Pairwise Alignments

Query, 567 a.a., Copper/silver efflux RND transporter, membrane fusion protein CusB from Variovorax sp. SCN45

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 4e-27
 Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 129 NSVTVSARVQQNLGVRTAVVSEGTVSPQVTTVGSIA--FNERDQVIVQARATGYVERLNV 186
           NS  +SA+ + N     +VV+E   S Q++   S+         V + A   G V+ + V
Sbjct: 17  NSAVLSAK-EPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIAV 75

Query: 187 RATLDQVKKGQPLAELYVPEWIAAQEE---FLSVQRMRGTDLASLIDGARQRMRQVGMND 243
           +A   QVKKGQ L +L   +  AA  E   +L  ++ + T+   L+        ++    
Sbjct: 76  QAN-QQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQR 134

Query: 244 GQIEL-VARSGRTQPRIT---LVAPIGGVVTELAAREGMTVSAGTTLFRINGLASVWANA 299
            ++E+  AR    Q  +    + AP  G V  +    G  VSAG+ L  ++ L+ +  + 
Sbjct: 135 ARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDL 194

Query: 300 EVPESQSALVRLGARVQARTPAAPGETFEGKVQAILPDVNPATRTLKARLELANPTGRLV 359
           ++PE     +  G +VQ  + A P   FEG V A+   +N  T  L+ R+   NP  RL 
Sbjct: 195 QIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLK 254

Query: 360 PGMFVSMQFTDMRADKTLLIPTEAVIQTG-KRAVVMLAEDNGRFRPVDVEIGLETGGQTE 418
           PGM +S +     A    +IP +A+  +G KR V ++ EDN   R  +V +G     Q  
Sbjct: 255 PGMLMSARI-HFPAISAPIIPVQALEYSGTKRFVYVIGEDNVAKRR-EVSLGARVENQVV 312

Query: 419 IKRGLQAGQRVVV 431
           I++GLQ G+++VV
Sbjct: 313 IEKGLQIGEKIVV 325