Pairwise Alignments

Query, 567 a.a., Copper/silver efflux RND transporter, membrane fusion protein CusB from Variovorax sp. SCN45

Subject, 370 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  115 bits (287), Expect = 4e-30
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 15/333 (4%)

Query: 137 VQQNLGVRTAVVSEGTVSPQVTTVGSIAFNERDQVIVQARATGYVERLNVRATLDQVKKG 196
           + + + V T  V E  ++  ++ +G +A +    V++  + TG ++++ V +    VKKG
Sbjct: 35  LMRTVPVVTGEVVEHPLAQSISLIGKLAADRA--VVIAPQVTGKIKQIAVTSN-QAVKKG 91

Query: 197 QPLAELYVPEWIAAQEE---FLSVQRMRGTDLASLIDGARQRMRQVGMNDGQIELV-ARS 252
           Q L EL   +  AA  E   FL+ +  +  +   LI        ++      +++  AR 
Sbjct: 92  QLLIELDDMKAQAAVAEANAFLNDETRKLREFEKLISRNAITQTEIDAQKASVDIARARL 151

Query: 253 GRTQPRI---TLVAPIGGVVTELAAREGMTVSAGTTLFRINGLASVWANAEVPESQSALV 309
              Q  +   +L+AP  G    +   EG  VS GT L  ++ L+S+  + +VPE   + +
Sbjct: 152 ASAQADLHYHSLIAPFAGKTGLINFSEGKMVSIGTELMTLDDLSSMRLDLQVPEHFLSQL 211

Query: 310 RLGARVQARTPAAPGETFEGKVQAILPDVNPATRTLKARLELANPTGRLVPGMFVSMQFT 369
            +G  V A + A PGETF GKV AI P VN  T  LK R++  N   RL PGM +S   T
Sbjct: 212 SIGMPVSATSRAWPGETFIGKVVAIDPRVNEETLNLKIRVQFENAKNRLKPGMMMSSTLT 271

Query: 370 DMRADKTLLIPTEAVIQTG-KRAVVMLAEDNGRFRPVDVEIGLETGGQTEIKRGLQAGQR 428
                   ++P +A+  +G KR V ++ ED+   R  +V +G   G Q  I  GL+ G +
Sbjct: 272 -FPPISAPIVPVQALEYSGTKRYVYVVGEDHIAHR-TEVILGARVGDQVLIDSGLKIGDK 329

Query: 429 VVVSSQFLIDSEASLKGVEARLNAAPGTAAPTA 461
           VVV  Q L++    LK  E  L A      P A
Sbjct: 330 VVV--QGLVNMRDGLKINEVVLEAKNDANRPAA 360