Pairwise Alignments

Query, 362 a.a., Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC from Variovorax sp. SCN45

Subject, 435 a.a., Outer membrane protein from Pseudomonas stutzeri RCH2

 Score =  272 bits (695), Expect = 1e-77
 Identities = 151/348 (43%), Positives = 221/348 (63%), Gaps = 1/348 (0%)

Query: 7   QAGVFQNPTLSVEVEDVRRDTRTTTVLLSQPFELGGKRGARIEAAERAIDVARAQLETKY 66
           QAG   NP LS   E +R D   TT+ LSQ  ELGGKR ARIEAA+RA+DVA A L+   
Sbjct: 80  QAGARPNPILSASQEGIRGDAPETTLELSQEIELGGKRSARIEAAQRALDVAAADLQDAQ 139

Query: 67  ADIRANVTAAFFATLISQDRVRLAQASLELARTGSETAGKRVTAGKVSPVEETKAKVAEA 126
           A +R  V  A++  L +Q+R+ LAQA+ +LA+     A +RV AG VSPVEET+A+VA  
Sbjct: 140 ARLRGAVMGAYYDVLTAQERLDLAQAASKLAKQAVNVANRRVRAGMVSPVEETRARVAAT 199

Query: 127 NVRLELVQARGELQTNLYQLRALTG-PTVVFDAVDGNALQIPKPQAQETIEDRITSAPSM 185
            V++EL QA  EL+    +L A  G P   F+ V   A  +P       +  R+  +  +
Sbjct: 200 GVQVELAQATAELEAARTRLAANWGNPQPRFERVKEPAEAVPPLPELAELYSRLNDSAQL 259

Query: 186 RQARLEVKRYGALSELEKAKRIPDITLNAGTMRSREVGRSQAVVGISVPLPIFDTNRGNI 245
            +AR E +R  A  +LE+  R  ++T++ G  RS E   +  +V IS+PLP+FD N+GNI
Sbjct: 260 TRARREAERRRAALKLERTNRFSNVTVSVGAQRSDEYNGTLGLVSISMPLPLFDRNQGNI 319

Query: 246 TEALRRQDKAEEDARALELRLRADVGGARQRYVTTLAEVEALQSDILPGAQTAFDAATKG 305
             A  R  +A+++  A+ +RL++++  A  R  T   + E L++D+LP AQ+A++AA+KG
Sbjct: 320 GAAQERAYQAQDELNAVHIRLKSELSQAHMRLRTARQQFELLRNDMLPSAQSAYEAASKG 379

Query: 306 FELGKFSYLDALDAQRTLLQARSQYLRSLSELHRSITDLDRLLGGPAA 353
           FELGKF++LD LDAQRTL QARSQYL +LS+ +++  ++ R++G  +A
Sbjct: 380 FELGKFTFLDVLDAQRTLFQARSQYLSALSQANQAAAEISRIVGDGSA 427