Pairwise Alignments

Query, 531 a.a., Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein CzcB from Variovorax sp. SCN45

Subject, 448 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  385 bits (990), Expect = e-111
 Identities = 191/344 (55%), Positives = 254/344 (73%), Gaps = 1/344 (0%)

Query: 189 QEGKVNMTDAQIKASSITLDTSAPESIRSGLQFPGEIRFNEDRTAHIVPRVAGVVDSVSA 248
           +  +V +++ QI A+ I+L T+ P  I+S ++ PGEI FN+DRTA +VPR++GVV++V  
Sbjct: 105 ETAEVELSETQILAAGISLATAQPAKIKSAIELPGEITFNQDRTAQVVPRLSGVVEAVKV 164

Query: 249 NLGERVKKGQVLAVVSSAAISETRSELQAAQRRRELAKTTYDREKSLWEQKISPEQDVLQ 308
           +LGE+VK+GQVLAV++S  +SE RSE  AAQ+R  LA+ TY REK LWE++IS EQD LQ
Sbjct: 165 DLGEQVKQGQVLAVIASTDLSERRSEFYAAQKRLALAQKTYRREKELWEERISAEQDYLQ 224

Query: 309 AQQALREAEISVANATQKLLTVGASTSS-SSLGRFELRAPFDGMVVEKHIALGESVKEDA 367
           AQQALREAE++VANA  +L  +G+      +L R+ELRAPFDGM+VEK I LGESV  D 
Sbjct: 225 AQQALREAELTVANANAQLQALGSDAGKPDALSRYELRAPFDGMIVEKDITLGESVNTDD 284

Query: 368 SVFTISDLSNVWAEMNVPARDLQQVRVGERVVVRSGAFDATTNGTVAYVGSLIGEQTRTA 427
            +F ISDLS VWA+++VPA  L  VRVG   V+ + AF+++ NGTV+YVGSL+G+Q+R A
Sbjct: 285 QIFIISDLSTVWADISVPANALSAVRVGSNAVIEATAFESSANGTVSYVGSLVGQQSRAA 344

Query: 428 RARVVLPNPQGAWRPGLFVSVEVLASEVISPVTVASSALQTIEDKPVVFLKVPGGFVPQP 487
            ARV LPNP+G WRPGLFV V+V A E   PV V+  A+ T+E+KPVVF++   GF  QP
Sbjct: 345 TARVTLPNPEGVWRPGLFVKVQVGAGEASVPVAVSPDAIHTLEEKPVVFVRTDHGFAAQP 404

Query: 488 VQIGRTDGKRVEIVSGLKAGAKYAAAGSFVVKSEQGKGSATHTH 531
           +  GR+D   VEI  GL+ GA+YA   SF++KSE GK SA+H H
Sbjct: 405 IVSGRSDSDAVEIKEGLQPGARYALDNSFIIKSELGKASASHAH 448



 Score = 45.4 bits (106), Expect = 4e-09
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 13/83 (15%)

Query: 14 RKQLFIIIFLLIVGAAAGALILRGGSS-------------KKAVEGGGHAEETAKGEDGH 60
          +KQ+F I+ +L V    G L+LR   +             +   E  GH++E A+ E  H
Sbjct: 14 KKQIFWIVVILSVALMLGGLLLRSSPAVPDAGDAHSEHGDESEHEDEGHSDEDAEAEGDH 73

Query: 61 GHGKSAEDDGHGHGKSEEGGHEE 83
          GH +   D  H  G +E+  HE+
Sbjct: 74 GHDEGGADSDHEVGAAEKDEHED 96