Pairwise Alignments

Query, 405 a.a., Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family from Variovorax sp. SCN45

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 94.4 bits (233), Expect = 5e-24
 Identities = 83/332 (25%), Positives = 151/332 (45%), Gaps = 26/332 (7%)

Query: 71  IVLEELKAQALADTVTVTATIRANQDRIARIAPRVEGRVATVAASLGDNVRTGQSLATLD 130
           +V E +++Q ++ +++V   ++A Q     IA  V G+V  +A      V+ GQ L  LD
Sbjct: 34  VVTESVQSQQISQSLSVVGKLKAEQS--VDIAAEVAGKVDMIAVQANQQVKKGQILIKLD 91

Query: 131 SLAVGEASSALSQARSAQRVADADYKRATALQAEEIIPQKDYLRAKAEHEKASATLRAAE 190
                +A +AL +A++  +           L     I   +    +A  E   A L AA+
Sbjct: 92  D---DKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQRARVEIGQARLNAAQ 148

Query: 191 DHLRLLGVPSGQSAGVTSVFPLTSPLAGTIIEKKAVVGGLAGPSDALFVVADLSTLWIEA 250
            +L  L +              T+P  GT+       G        L  + +LS + ++ 
Sbjct: 149 ANLADLHI--------------TAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDL 194

Query: 251 NLAEAQLAKVRVGAKATVTVGAYPDERFEGRVTYVASILDKETRSIPARIEVKNGEGRLK 310
            + E  L ++  G K   +  A+P+ +FEG V  V S +++ET ++  R+   N + RLK
Sbjct: 195 QIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLK 254

Query: 311 PEMFATATIESPSPQSAPKTDVLTVPDQAIVLMQGQPNVFVF-ENGAYEQRAIDPGDRLG 369
           P M  +A I  P+  SAP      +P QA+     +  V+V  E+   ++R +  G R+ 
Sbjct: 255 PGMLMSARIHFPA-ISAP-----IIPVQALEYSGTKRFVYVIGEDNVAKRREVSLGARVE 308

Query: 370 TRTVVKSGVKAGEQVVSAGTYALKARVLKSQI 401
            + V++ G++ GE++V  G   ++     S++
Sbjct: 309 NQVVIEKGLQIGEKIVVQGIVNMRDNARVSEV 340