Pairwise Alignments

Query, 746 a.a., Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I from Variovorax sp. SCN45

Subject, 699 a.a., bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) from Shewanella amazonensis SB2B

 Score =  358 bits (919), Expect = e-103
 Identities = 232/720 (32%), Positives = 370/720 (51%), Gaps = 52/720 (7%)

Query: 37  MLARARAFAEPLIADETLDTGENTLAHADAVAAIVAKMGGSEAMQAASYLVYACQHLNRP 96
           +L +A   A      +   +GE  + H  AVA I++ M        A+ L    +  +  
Sbjct: 22  LLKQAYQVARDAHEGQMRTSGEPYITHPVAVAKILSDMRLDHETLMAALLHDTIEDTHVT 81

Query: 97  QEVIAKVFGDNFAALAVETTKLVRVQEQARSAAQGHHIEGAGAQTENVRKMLLAFSRDLR 156
           +E +A++FGD  A L    +KL +++ + +  AQ           EN RKM++A ++D+R
Sbjct: 82  KEDLAELFGDAVADLVEGVSKLDKLKFRDKKEAQA----------ENFRKMMMAMTQDIR 131

Query: 157 VVMLRLASRLQTLRHAAASKQPAPEGVARESLQVFAPLANRLGIWQVKWEIEDLSFRFLE 216
           V++++LA R   +R   A +      +ARE+L+++AP+ANRLGI  +K E+EDL F+   
Sbjct: 132 VILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKTELEDLGFQAYY 191

Query: 217 PETYKLIARLLDEKRIEREGHVEQLRSQLERELQNEGVKATVQGRPKNIYSIVKKMRGKS 276
           P  Y+++  ++   R  R+  ++ +++ ++  L++ G+ A V+GR KN+YSI  KMRGK 
Sbjct: 192 PMRYRVLKEVVKAARGNRKELIQNIKTGIQARLEDAGIHAKVKGREKNLYSIYNKMRGKE 251

Query: 277 LDFAQVFDILALRVVVSDVKDCYAALAWVHSHFQPIDEEFDDYIARPKPNGYQSLHTVVR 336
           L F +V DI A RV+V  +  CY  L  +H  ++P    F DYIA PK NGYQSLHT   
Sbjct: 252 LQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHT--- 308

Query: 337 ELVDGKPGKPIEIQIRTEEMHDHAEHGVAAHWAYKEAGHKGYAGVWA-SGEYDAKIAVLR 395
             + G  G P+EIQIRT++M   A+ GVAAHW YK     G       + ++   +  L+
Sbjct: 309 -SLFGPHGVPVEIQIRTDDMDQMADKGVAAHWVYKNGNENGSTTTQVRARKWMQSLLELQ 367

Query: 396 QLLAWERDLSGGLQGQGLFDDRIYVLTPDAAIVELPQGATPVDFAYTVHTTLGHRCRGAR 455
           Q  +   +    ++ + LF D IYV TP+  I+ELP GAT VDFAY VHT +G+ C GAR
Sbjct: 368 QSASSSFEFVENVKTE-LFPDEIYVFTPEGRILELPVGATAVDFAYEVHTDVGNTCVGAR 426

Query: 456 VDGAMVPLNTPLSNGQTVEIIAAKEGGPSRDWLNAELGYLASHRARAKVRAWFNAQITHE 515
           V+    PL+ PL +GQTVEII AK   P+  WLN    ++ + +ARAK+R         E
Sbjct: 427 VNRQAYPLSQPLISGQTVEIITAKGAKPNAAWLN----FVVTGKARAKIRQVLKNLKQDE 482

Query: 516 TVARGREAVEKLLQREGKTAVR---LEDLASQLGFKSADHLFEVVGKDEFSLRNIETLLR 572
            +A GR  +   L      +V    L+ +  +   K  + L   +G     L N  ++  
Sbjct: 483 AIALGRRLLNHALGENKLDSVAPELLDKVIQETKHKDLNSLLADIG-----LGNAMSI-- 535

Query: 573 PPEPAPGPDDGVLIKKARGS---EKSGKGGVLVV-GVSSLMTQLAKCCKPAPPDSIRGFV 628
                      V+ ++  G    EK  +  ++ + G   ++   AKCC P P D++   V
Sbjct: 536 -----------VIAQRLTGGAVPEKQSETHLMPIRGAEGMLVSFAKCCHPIPGDAVIAHV 584

Query: 629 TRGHGVSVHRSDCSNFRTMASKDNERVIDVEWGAPKKGAEAPVYAVDVAVEAADRQGLLR 688
           + G G+ VH  +C+N R     + ++ I V W       +   Y  ++ VE  + QG L 
Sbjct: 585 SPGKGLVVHMENCANIRGYQG-EPDKYIPVHWDK----VDGVEYQANLRVEIVNHQGALA 639

Query: 689 DISDVFAREKMNVIGVQTQSIKGTAWM-TFTVEIADAARLTQVLGVVTAVIGV-RSARRR 746
            I+ + A E  N+  + T+   G  ++    + + D   L  V+  +  +  V R++R R
Sbjct: 640 KITSIIASEGSNIHNLSTEERDGRVYLINLRISVRDRIHLANVMRRIRVLPEVLRTSRNR 699