Pairwise Alignments

Query, 889 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 617 a.a., integrase catalytic subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 61.2 bits (147), Expect = 2e-13
 Identities = 73/293 (24%), Positives = 114/293 (38%), Gaps = 39/293 (13%)

Query: 369 SSASDLGAKWRTVMRWKAKYREFEARYGNGFLG-LITQDHLKGNRTPRTETKEQELMAKA 427
           ++ +D    WRT++RW+  Y +      NG L  L+ + H  GNRT R +  E       
Sbjct: 79  TTTTDRRPNWRTLVRWRKSYID-----SNGDLASLVAKRHKMGNRTSRVKGDEVFFEQAL 133

Query: 428 FKFLKAPLPRDVSAGYAYY---IALCEEEHIEPR----SQDKFYRKWKRQDIHQVTEDRE 480
            +FL A  P+ VS  Y YY   I +  E  ++ +    S   F ++ K    + V   R 
Sbjct: 134 TRFLDAKRPK-VSTAYQYYKDAITIENESIVDGQIPIISYKSFNQRIKSLPPYPVAVARH 192

Query: 481 GKRAAQVQMPPRMSGGAHVNQGPVEGDSPFARVHIDHRQSDMFCRRLNGVDLIGKPWFSI 540
           GK  A        S   H+    +       RV IDH   D+          +G+P+ ++
Sbjct: 193 GKFKADQWFAYCSS---HIPPTRI-----LERVEIDHTPLDLILIDDELSIPLGRPYLTL 244

Query: 541 AIDAFTRLVLGLWTSMLEPSHASVMMVLRDIVRR----------------HGKLPMMVIT 584
            ID F+  VLG   S   PS+ S    +   ++                  GK   +V+ 
Sbjct: 245 IIDVFSGCVLGFHLSYRSPSYVSAAKAIVHAIKPKSFEGLDIELQNEWPCFGKFENLVV- 303

Query: 585 DGGREFQAKLIQQMLALYHCEHALRPNSEPRYGNPVERMNLTIDHHLTTVLLG 637
           D G EF +K ++             P  +P     VER    I+ +  T + G
Sbjct: 304 DNGAEFWSKSLEHACKEAGINIQYNPVRKPWLKPFVERFFGMINEYFLTEIPG 356