Pairwise Alignments

Query, 468 a.a., Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) from Variovorax sp. SCN45

Subject, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

 Score =  554 bits (1428), Expect = e-162
 Identities = 280/461 (60%), Positives = 342/461 (74%), Gaps = 21/461 (4%)

Query: 4   VASPERTATPTAPKVGFVSLGCPKALTDSELILTQLSAEGYQTAKTFEGADLVIVNTCGF 63
           +A   + +  T  K+GFVSLGCPK L DSE ILTQL  EGY+   ++  +D+VIVNTCGF
Sbjct: 21  IAEQSQNSQTTGNKIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGF 80

Query: 64  IDDAVKESLDTIGEALAENGRVIVTGCLGAKTGDQGGNLVRQMHPSVLAVTGPHATQEVM 123
           ID AV+ESLDTIGEAL ENG+VIVTGCLGA+  +     +RQ+HP+VL +TGPHA Q V+
Sbjct: 81  IDSAVQESLDTIGEALKENGKVIVTGCLGAREDE-----IRQVHPNVLGITGPHAYQNVL 135

Query: 124 DAVHANLPKP-HDPFIDLVPNTFGVAGLKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL 182
           + VH   PKP H+PF  LVP+     G+KLTP+HYAYLKISEGCNHRCTFCIIPSMRGDL
Sbjct: 136 EHVHQYAPKPAHNPFTSLVPDH----GVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDL 191

Query: 183 VSRPVGDVLSEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVRTL 242
           VSRPVG+++ EA+ L   GVKELLVISQDTSAYGVD K+  GF +G PV+  +  L   L
Sbjct: 192 VSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEEL 251

Query: 243 GEIAEPYGAWVRLHYVYPYPSVDEVIPLMASGQVLPYLDVPLQHSHPDVLKRMKRPASGE 302
           G++    G WVRLHYVYPYP VDE+IPLMA G+VLPYLD+P QH+ P VLK MKRP   E
Sbjct: 252 GKM----GIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAE 307

Query: 303 KNLERLARWREVCPELVIRSTFIAGFPGETEQEFEHLLDFIREAEIDRAGCFAYSPVEGA 362
           + LER+ +WRE+CPELVIRSTFI GFPGETE++F+ LLD+++EA++DR GCF YSPVEGA
Sbjct: 308 RTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGA 367

Query: 363 TANDIPGMLPEPEREARRARFMEVAEAVSIAKLQRRIGSTMQVLVDSAPGLGRKGGVGRT 422
            AN+I   +PE  ++ R  RFM V + +S AKLQ+RIGSTMQVL+D    +  +G +GRT
Sbjct: 368 AANEIEDQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDE---VDEEGAIGRT 424

Query: 423 YADAPEIDGTVRLLPPEKISKTLKVGEFTRARIVGAEGHDL 463
           YADAPEIDG V L         LK GE     I  A+ +DL
Sbjct: 425 YADAPEIDGLVYL----NGETNLKPGELVNVVIEHADEYDL 461