Pairwise Alignments

Query, 529 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  158 bits (399), Expect = 6e-43
 Identities = 139/509 (27%), Positives = 220/509 (43%), Gaps = 33/509 (6%)

Query: 39  WTHRDAAQAAAVRAGALAAAGVARGDRIAVMCGNRIEFLESFLGAGWLGASTVPVNTASM 98
           +T+++  +   + A  L   G+ +GD I +   N  ++L        +G   V VNTA  
Sbjct: 34  FTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYK 93

Query: 99  GPQVEYFLANSQAKLLVIEAAF------------VERLATADLARTS------LREIWVV 140
             ++ Y +  S  K L I  +F            V  L T+   + +      L+ +  V
Sbjct: 94  SHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVIYV 153

Query: 141 GGSEAVEWQVPAGVRVVPYPEAGDALEPAP--VQPGDPLAILYTSGTTGPAKGVICPHAQ 198
           G  +         + ++    + + L  A   +   D + + YTSGTTG  KGV+  H  
Sbjct: 154 GQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTHKN 213

Query: 199 YFWWGVNSAEVLGVGADDVLCTTLPLFHINALNTFAQAALT-GAEVVFESRFSASGFWPA 257
               G    E      ++ LC  +PLFH   +     A LT G  +V    F       A
Sbjct: 214 ILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLEIFDPLLVLAA 273

Query: 258 MRASRATVVYLLGAMVPILLAQPEGAGEREHRVRIGLGPGVPSAAGATFKARTGVSLLE- 316
           ++  + T VY +  M     + P         +R G+  G      A  K  + + + E 
Sbjct: 274 IQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREI 333

Query: 317 --GYGSTETNFAIA-TAPDSP---RGGVMGWLRPGFQARVAD-EDDVALPPGEAGELLLR 369
              YG TE +     T+ D P   R   +G   P  + ++ D E    L PG  GE+  R
Sbjct: 334 TISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCR 393

Query: 370 ADEPYAFASGYFNMPEKTVEAW-RNLWFHTGDRVVRDADGAFRFVDRIKDAIRRRGENIS 428
               Y    GY+ MPEKT E   ++ W H+GD  V D DG ++ V RIKD I R GENI 
Sbjct: 394 G---YNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIY 450

Query: 429 SFEVEQVLLSHPGVAACAVYPVRSELAEDEVMAALVAREGVPVDPAELARFCEGRLPYFA 488
             E+E+ L + PG+    V  +  E   + V A ++ +EG  +   ++  F   ++  + 
Sbjct: 451 PREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYK 510

Query: 489 VPRYIDVLADLPRTENGKVQKFKLRERGV 517
           VP+++ V+ + P T +GK+QKFKL E  V
Sbjct: 511 VPKHVFVVEEFPMTASGKIQKFKLTELAV 539