Pairwise Alignments

Query, 381 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 378 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 105/375 (28%), Positives = 155/375 (41%), Gaps = 42/375 (11%)

Query: 11  ATALALTAAQAMAADLKIGFISSLSGPVAALGIPYEKGIRAA---IAEHPEIAGRKVQLI 67
           A A AL  +    AD+K G    ++G  AA G  Y KG +AA   I +   + G K+ L+
Sbjct: 14  AVAAALGVSAFAQADVKFGVAGPMTGANAAFGEQYMKGAQAAADAINKAGGVNGEKIVLV 73

Query: 68  VLDDASDPTTAGRNARKLVTEDKVDVLIGTSGVPGAMAIAAVAKELNTPLISP----TPV 123
             DDA +P  A   A +LV +DKV  ++G       +  + V  E     I+P      V
Sbjct: 74  AGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGIIAITPGSTNPQV 133

Query: 124 TIAGPEGAWTVTVSQPFPLMVAG--VVDRMKKSGVKTVAFIGFSDALGDLAYDSLMKSAD 181
           T  G    + +        +VAG  +VD +K    K VA +   D  G    D+      
Sbjct: 134 TERGLSAMFRMCGRDDQQGIVAGDYIVDVLKG---KKVAVLHDKDTYGQGLADATKAQLA 190

Query: 182 AAGIKVVANERYARSDSSVAGQVLKIVAARPDAVFAGNSGTPGALPYI-ALADRGYKG-K 239
             G+K V  E   R +   +  V KI AA  D V+ G    P A P +  L ++G K  K
Sbjct: 191 KRGVKEVLYEGLTRGEKDFSAVVTKIRAAGADVVYFGGL-HPEAGPLVRQLREQGLKDVK 249

Query: 240 IYGTHGLINADFVRVGGAS--IEGLQVPSGPVLVADQ--LPDSNPIKKVSMGFRSAYQKV 295
                G++  + V   G +  ++G+ +  G    AD   LPDS   K V   FR      
Sbjct: 250 FMSDDGIVTDELVTTAGGAQYVDGVYMTFG----ADPRLLPDS---KAVVEEFRK----- 297

Query: 296 NGAVPTDAFSSYTYDAYLLLA---DAASRTKGEPGTPAYRTALRDAIVSTKE-------L 345
           NG  P + ++ Y Y +   LA   + A   KGE      +      ++  KE        
Sbjct: 298 NGTEP-EGYTLYAYASVQALAAGFNGAKSNKGEDAAKWLKANPVQTVMGKKEWDTKGDLK 356

Query: 346 VGTHGVYNFKPDDRY 360
           V  + VY +  D +Y
Sbjct: 357 VSDYVVYQWDKDGKY 371