Pairwise Alignments

Query, 388 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 430 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 25/245 (10%)

Query: 30  LKVGFITSLSGPVSSLGIPYDKGMKAAVAYKSE---VGGRKVQVIQLDDASDPSTAARNA 86
           +++G   +L+GP ++LG+ Y  G++A  A  +E   VGGRK+Q++ LDD  DP     N 
Sbjct: 28  VRLGMSAALTGPTAALGLSYLAGVRAGFAEVNEAGGVGGRKIQLVALDDGYDPDRVIHNY 87

Query: 87  RKLIEEDKVDVIIGTAGAPGSLAIAGVARETKTPLISIANADLAGEEGAWMVTL-PQPAP 145
            +L+EE++VD + G  G P    +  +    +    S A+A L    GA+ ++L PQ + 
Sbjct: 88  IRLVEEERVDQLFGFTGTPTVTRVLPLLVHGR----SAASAMLFPLTGAYPLSLEPQASH 143

Query: 146 LM---------MGAMVEKMKQAGVKTVAYIGYSDAWGDLVYDALMKSAPAAGIKVVSNER 196
           +          + A+VE++   GV+  A    +DA+G   +  L +S    G+ +V++  
Sbjct: 144 IFSLRASYADEIDAVVERLVGVGVRRFAIAYQADAYGREGWHDLRQSLRRYGLDMVADAA 203

Query: 197 YARS------DSSVAGQVLKIVALRPDAVITGASGTPGALPYLALAERGYKGKIYGMHSL 250
           + R+      D SV   +L  V   P+AV+   +    A     L   G+ G I     +
Sbjct: 204 FQRNGVLRVEDISVQSGIL--VDAHPEAVLCMGTDVSCAALACNLRNVGFVGPIIMPSFV 261

Query: 251 INPDF 255
           +N  F
Sbjct: 262 VNRGF 266