Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 542 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  140 bits (352), Expect = 2e-37
 Identities = 140/480 (29%), Positives = 206/480 (42%), Gaps = 44/480 (9%)

Query: 60  GYGHGHRVGLLLENRPAFIFHWLALNALGVSVVPINAEMRSAELVYLIGHSEIGLAVT-- 117
           G     RV    +N  A++  WLA    G+  VP+N  +   EL Y++  S         
Sbjct: 60  GLSKADRVAAYGKNSDAYLILWLACTRAGLIHVPVNYSLTEHELAYVLDQSGARALFVDD 119

Query: 118 ----LQERAADLRAAAAQAGIEFETMGPD--DAVPPARTPA---PRAHEPVGTDTECGLL 168
               L +R    R  A +  +       D  D +  A   A   P   +   TD    +L
Sbjct: 120 SLKGLVDRIPAQRQLAIRGSLHSNETTSDRSDILRIATGSACDLPPEVDIAETDV-VQIL 178

Query: 169 YTSGTTGRPKGCILSNAYFLRAGEWYAALDGVCSIRPD---KERVITPLPLNHMNAMAFS 225
           YTSGTT  PKG + S+   +     Y++    C +  D    +R +  LPL H   M   
Sbjct: 179 YTSGTTSDPKGAMHSHRSLMTE---YSS----CLLHLDIKASDRCLAALPLYHSAQMHVF 231

Query: 226 TMVVLVAGGCLVQLDRFHPKTWLASAK-ESGATIVHYLGVMPAMLLSAPASAADRDHAIR 284
           TM  L+AG      D   P+  L   K E   +      V  A+L       A   H  +
Sbjct: 232 TMPALLAGAFSCLTDTPTPEEILRLLKTEQLNSFFAPPTVWIALLRHEQFVEAQLRHVQK 291

Query: 285 WGFGAGVDRKNHAPFEERFGFPLVEA-----WAMTETGAAACIMANREPRLVGTSCFGRQ 339
             +GA +  +   P     G  L ++     +  +E    A ++   E R   TSC GR 
Sbjct: 292 LYYGASIMPE---PIARELGARLPQSGLYNCYGQSEIAPLATVLTPEEHRERPTSC-GRP 347

Query: 340 EDFVEIRLVGEDGGD-AAVDAPGELLVRSAGSDPRRYFFSGYLKDEEATREAWADGWFHT 398
              V  R++    G+  A    GEL+ RS           GY +    T EA+ADGWFH+
Sbjct: 348 VSNVLTRIIDPSTGEECAPGVAGELVHRSP------QLMVGYWEKPAETAEAFADGWFHS 401

Query: 399 GDLVRRDAQGNFFFVDRKKNVIRRSGENISAVEVESVLNQHPAVKASAVAATPDAVRGDE 458
           GDL  RDAQG  + VDR K+++   G  +++ +VE  L +HP V   AV   PD    + 
Sbjct: 402 GDLGYRDAQGYIWIVDRIKDIVNTGGVLVASRDVEEALYRHPHVAEVAVIGVPDQKWIEA 461

Query: 459 VLACVVMREDAGAVHPEQIAASIVQHALAQLAYYKAPGYVAFVDALPLTPSQKIQRGQLR 518
           + A VV++++A        A +++ HA A LA +K P +V FV+ LP   S K+ +  LR
Sbjct: 462 IAAVVVLKQNA-----TLDAQALLHHARAHLAPFKVPKHVHFVEQLPKNSSGKLLKRVLR 516