Pairwise Alignments

Query, 627 a.a., ATP-dependent RNA helicase NGO0650 from Variovorax sp. SCN45

Subject, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  247 bits (630), Expect = 8e-70
 Identities = 153/443 (34%), Positives = 239/443 (53%), Gaps = 48/443 (10%)

Query: 57  FIKLGLAPELIAAVADMGFTQPTTVQEKVIPIAMGEQAGGAQSARFVDLMVSSQTGSGKT 116
           F +LGL   L+  ++++G   PT +Q++ IP  +  +          D++  +QTG+GKT
Sbjct: 8   FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGK----------DVLAGAQTGTGKT 57

Query: 117 AAFLLPVLHTLIKRQAEAEAEAKAEFQRLAAEAAARGEAVPKKPKRKDPTNARHFKAATP 176
           AAF LP++   I++  + EA +K E +                                 
Sbjct: 58  AAFGLPLIQRFIEQPWQREANSK-EIR--------------------------------- 83

Query: 177 GALILCPTRELAQQVAHDAIELVRHCRGLRIANVVGGMPYQLQIARLQNA-DLVVATPGR 235
            AL+L PTRELAQQV  D+++       L+I  V GG   ++Q+  L+   D+++ATPGR
Sbjct: 84  -ALVLVPTRELAQQVL-DSLQAYAKGTELKIVAVYGGTSMKVQLNHLRGGVDILIATPGR 141

Query: 236 LLDLQRSMQIKLDQVKFLVVDEADRMLDLGFADDLAEVNQLTIERQQTMMFSATFAPRIQ 295
           LLD      + L +V+ LV+DEADRMLD+GF  DL  V +     +QT+ FSATF  +I+
Sbjct: 142 LLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLRQTLFFSATFDSKIK 201

Query: 296 QLATRVMREPQRVTIDSPQEKHANIKQVLFWADNAQHKRKLLDHWLRDTSINQAIVFAST 355
            +A R+MR+P  V +         ++Q+++  D  + KR+LL + +   +  Q +VF  T
Sbjct: 202 AVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDK-KRKRELLSYLIGSKNWQQVLVFTKT 260

Query: 356 QVECDGLANDLQQDGFSAVALHGALSQGLRNRRLMALRQGQVQILVATDVAARGIDVPTI 415
           +   D LA +L+ DG  AV+++G  SQG R + L   + G+V+ L+ATDVAARG+D+  +
Sbjct: 261 RQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQL 320

Query: 416 THVFNFGLPMKAEDYTHRIGRTGRAGRDGLAITFAEFRDRRKIMDIEHYSRQQFKAEVVP 475
             V N+ +P KAEDY HRIGRTGRAG  GLA++     ++ ++  IE     +   E + 
Sbjct: 321 EQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIERLLNTRLPQEWLK 380

Query: 476 GMEPQQRMPQSRPQGDFGGRGRD 498
           G EP   + +        GR  +
Sbjct: 381 GFEPSPVVHEENSPRRSAGRSSE 403